| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5703 |
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| Symbol | |
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| ID | 5320005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 676658 |
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| End bp | 677959 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640777428 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_001314360 |
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| Protein GI | 150377765 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTGG CAAGTCCGTT CTCCATCACG GTGGTGGTCA TAACCGTGCT CGCGTTCATG
GGGCTACCGA TCGGCCTCTC AATGATCAGC GGCTCGATTC TCTACCTCTG GCTTGCCGGA
GCAGACATGG GAATTGTAGC CGAGCAGTTT CTCAACGGTA TGTATTCGAA CTACGTCATC
CTGGCGGTGC CGCTGTTCAT CCTGGCGGCG GAATTCATGA ACGTGGGATC CATGACCGAG
CGCCTGCTCA AATTTTGCAA CGTCCTCGTC GGGCGTTTCC GCGGCGGTCT CGCCCAAGTT
AACATTGTCC AAAGCATCAT CTTTGCCGGC ATGTCCGGCT CGGCGATCGC CGACGCCGCA
GGCAGTGGCA AGATGATGCA GAGTATGATG ACGCGCGACG GCCGCTACAC ACCGAGCTTT
GCGGCCGCCC TAACCGCCGT GACCGCTGTC GTTGGCCCGA TCATCCCGCC ATCGATCCCG
ATGATCATCT ATTCCCTCGT TTCAGATGCG TCCATCGGCT ATCTCTTTCT AGCCGGCATG
GTACCGGGGC TTTTGATGGC CGTTCTGCAA ATGGTGCAGG TAGTGATCAC TGCCCGGCGT
AAAAATTTCC CGGTTGAAGA ACCGGTGCCG CTTCGCGAGA TTCCGGGAAT CACCGTCCGG
GCCTTTCCGG CGCTGATGAT GCCCGTTGTG TTGCTCGGTT GCATCTATTC CGGCGTTACC
ACGCCGACCG AGGCAGCGGC CATCGCTGCT GCTTACGCTC TCATCATATC GGTCGTCCTC
TACCGCAGCA TCAGCCTCAA AGACTTCTAC GGCTCACTTG CGGCAAGCGC CAAGTCGACG
GCCTCGATCG GCATGCTGAT CGCCGGTGCA TTGGTCTTCA ACTATGTCGT CACGATCGAA
AACATTCCCC ACTCAATCCG GGTTCTGTTG ACCGGGTGGG AGTTGAGCCC GGCTGGCTTC
CTGATCCTCG TGAACGTCAC TCTGCTCGTT CTCGGTTGCC TGCTCGAGGG AACCGCGATC
CTGCTAATCA TCGTGCCGGT GTTCATACCT ACAGCGCAGG CCCTTGGCAT TGACCTTGTC
CACTTTGGCG TTGTCGTGGT CGTCAACATC ATGCTGGGCC TGGTAACGCC GCCATACGGT
TTGCTGCTGT TCATCGTGGC GAACATATCT GGAGCACCGA TCAAGAGCAT CATCGTAGAT
ACCGGACCCT TTCTATTTTG GATGGTGGTG TGCCTGATCT TCATAACATT TGTGCCTGAC
AGCGTGCTCT GGCTGCCAAG GCTGCTTGGA TACCAGGGCT GA
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| Protein sequence | MNLASPFSIT VVVITVLAFM GLPIGLSMIS GSILYLWLAG ADMGIVAEQF LNGMYSNYVI
LAVPLFILAA EFMNVGSMTE RLLKFCNVLV GRFRGGLAQV NIVQSIIFAG MSGSAIADAA
GSGKMMQSMM TRDGRYTPSF AAALTAVTAV VGPIIPPSIP MIIYSLVSDA SIGYLFLAGM
VPGLLMAVLQ MVQVVITARR KNFPVEEPVP LREIPGITVR AFPALMMPVV LLGCIYSGVT
TPTEAAAIAA AYALIISVVL YRSISLKDFY GSLAASAKST ASIGMLIAGA LVFNYVVTIE
NIPHSIRVLL TGWELSPAGF LILVNVTLLV LGCLLEGTAI LLIIVPVFIP TAQALGIDLV
HFGVVVVVNI MLGLVTPPYG LLLFIVANIS GAPIKSIIVD TGPFLFWMVV CLIFITFVPD
SVLWLPRLLG YQG
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