| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5686 |
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| Symbol | |
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| ID | 5319988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 652389 |
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| End bp | 655631 |
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| Gene Length | 3243 bp |
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| Protein Length | 1080 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640777413 |
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| Product | glycosyl transferase group 1 |
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| Protein accession | YP_001314345 |
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| Protein GI | 150377750 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG0438] Glycosyltransferase
[COG0673] Predicted dehydrogenases and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAC GTTTGCGCAT AGTGCTTGCG ACCGACAGCG TGGATCCATC CGGAATGGGT
GAGCACATGC TGACGCTCGG TCGGGCGCTC CAGGGCCAGT TCGATGTGAC GCTTGCCGCC
ATCGATGGGA TCGAAGCCGC TCTGCTGACA AGGGCTGCGC GTTGCGGCGT CGCGGTCAAA
GGCATTGATG ACAATGCATC GTTCGAACAT TGGCTGGAGT TTTCGGGCGT TTCTTTGCTC
CACGTTCACG CTGGCATCGG TTGGGAGGGG CATGAGATAG CGCGCGCCGG GGTCGCCTGC
GGCATCCCGG TTATCCGTAC GGAGCATCTC CCCTATCTGC TCACCGATGC CGAGCAGAAG
GAGCGCTATG CCAGAGAAAG TGATGCTCTT ACGCATCATA TTGTCGTTTC GGAAGCATCG
AAGTTAAGCT TCGAGAGCAA GGGGGTCAAG GGCAACCGAA TGACGGTCGT CCGCAATGGA
ATCTTTCCGC TAGGCGCACG GGACATTGCC GGTCGCAGCA AAGTCGCACT TGGGCTCGAC
GGGAAAAGCG TCCTCATTAC GGTGGCGCGC TTTTCTAAGC AGAAGGACCA CGCCACCCTG
ATTAAGGCAA TGCCGGCAGT ATTAGCCGCG GACCCGTCGG TCGTTTTGCT TCTGGTAGGC
AAAGGCGAGG AATTGGAGGC CGTTCGGGCC CTGGTCGAAG ACCTGTCGCT TGGCCCGCAT
GTCCAATTTC TGGGGCATCG CATCGAGGTC GACCAGTTGA TGGGCAACGC CGACCTTTTC
GTCCTGCCGT CGCGATTCGA AGGGCTTCCC TTAGCAGTGC TCGAAGCAAT GTCGATCGGA
CTACCGGTCG TCGCAACCCG GATCGGCGGC ACCGTCGAGG CGCTTGGATC GGAACATCCG
TTCCTGGCTG AGTGCGAAGA TCCGTCCTCA TTGGCTCGCG TGCTGATCGA AGCTTTGAGC
GACCCGGAAC GGGCGAAAAC GATCGGCCGG GCCGGCCGGG CCAGGTTCGA CACTGAATTT
TCAGCGCGGC GAATGGCGGA CGAAACCGCG GCTGTCTATC GGCGATTTCT TTCCGAGCGG
ACGGAGAATA AACAAGGACA CCATTTTATG GACAAGACAC GTGTCGGCTT CATTGGCGTC
GGGGGCATCG CCCACCGGCA TCTTGATATT TTCGCCGGTT TCGAGGACGT GGCGCTCGTT
GCTTTTGCAG ACCCGGACTT CGCACGCGCC GAGCATGCCG CGTCGCGGTT CGGTGCGAAG
GCGTTCGAGA GCCACAGTGC GATGCTGGAG AAAGAGGCGC TGGATGCGGT CTATATCTGC
ATTCCCCCCT TTGCCCATGG CGACGCCGAA CGGGATCTGA TCGCGCGTGG CATCCCGTTC
TTTGTCGAGA AGCCCATTAC GCTCGATATC GAGCTGGCGG AGGAACTCTG TGCCGCGATT
GAAGCCGCAA AGCTGATCAC GGCTGTCGGT TATCATTGGC GCAATCTCGA TACAGTAGAG
GAGGCGCGCC GGCTTCTGGC CGAAAATCCA GCTCAACTTC TTTCGGGCTA TTGGCTGGAC
CAGACGCCAC CGCCGCAATG GTGGTGGAAG AACGACCGCT CAGGCGGCCA GATGGTTGAG
CAGGCGACCC ACATCATTGA TCTGGCGCGA TACCTCATTG GTGAAGTCAC CGACGTTTAT
GGCCGCGTCG GCTTCAAAGA CCGCCCCGAA TTTCCAGGCC TCGATGTGCC GGCGGTGACC
ACTGCGAGCC TCACCTTCCA ATCGGGCGTT ATCGGCAACA TCTCCTCGAC ATGTCTTCTC
GGCTGGAGCC ACAGGGTCGG ACTGAACATC TTCGCCGACC GACTTGCGAT CGAGCTGACC
GACCATGACA TCATGATCGA TGTGGGTGCT GGTCGACCAG TGCGGCATGC CCAGGGCGAT
CCCGTCTGGC GAGAAGATCG CGATTTTGTC GACGCCGTGC GCGGGGGAAA TAATAACATT
CGCTGTGCCT ACGCGGATGC GCTGGCGACG CACCGGCTCG CGCTGGCGGT CGCTTCCTCG
GCGCGCAGCG GCGAGCCGAT AAAGCTCGAT CCGCCTGCCA TAGTCCGCAA CGCTGTGACG
ACGCTGCAGT ATCCACCGTC GTCCGAAGCC TGTCAGGGAT TATCCCCAGG CCACCGTGCC
ATTCGCTCTC TTGGCATTGA AGGGCCCGGA AAAGCATTCT TCTTCGACTA TCAAGAGGGT
CCGCCCGCTG ACGGCCATGT CCGGTTGGAA ACGCTCTTTA CCGGCTTTTC CGCCGGCACC
GAACTTACCT TCATGAAGAA CACTAATCCT TACTTCCACT CCCGTTTCGA TAGCGAGCGT
GGCGTGTTCT TCGAGAACGA GCCGGATCTT CACTACCCGG TGCCTTTTCT GGGATACATG
GAAGTGGCGC GCGTCTCGGA GTCGAAGGCT GCAGGCTTCA AGGAAGGGGA TGTCGTTGCC
GCGACCTACG CGCACAAAAG CGGCCATACT GCCGATCCAT TCCTCGACTT GCTGGTGCCC
TTGCCAGCCG AAATCGATCC CGTTCTTGGC GTCTTCGTAG CGCAAATGGG CCCTATCGCG
GCCAACGGCA TTCTACATGC GGATGCGGAC GCTCTGGGGA GCAATGTATC CTGTCTCGGA
GTGGGCGTTG CGGGGCGTCA CGTGGTCGTG CTCGGAGGAG GCACGGTTGG ATTGATGACG
GCGCTTTTTG CGCAGAAGGC GGGGGCCTTG GAAATCGTCG TTGCCGATCC TTCGGCGTTT
CGGCGGAACA AGGCGCGGGG CATGGGTTTG ATTGCGATGA CCGAGGATGA GGTCTGGCAG
CACGCGAAAA CGCGATGGCA TAACGGCGGA AGTGATCGCG GCGCCGATGT CGTGTTTCAG
ACACGGGCGC ATCCGTGGAG CCTCCACGTC GCGCTGAAGG CACTGCGCCC GCAGGGCACG
GTCATTGATC TCGCATTCTA TCAGGGCGGC GCCGAGCGGC TGCGGCTAGG CGAAGAGTTT
CATCACAATG GCCTCAACAT CCGCTGCGCA CAGATTAACC GCGTACCCAG AGGACTGGCG
CCGCTGTGGA ACAGGCGCCG GCTTGCCGAG GAAACGGTCC AGCTCTTAAA AATCTACGGA
GCTCTCATTC GCGAGCATAT GATCACGCAT GTCGTTCCAT TCGACGATGG GCCAAAATTC
CTCGCTGATC TGGTGGAGAA CCGGCCGGAA TTCCTGCAGA TCGTCTTCAA GGTCAGCGGA
TGA
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| Protein sequence | MNKRLRIVLA TDSVDPSGMG EHMLTLGRAL QGQFDVTLAA IDGIEAALLT RAARCGVAVK
GIDDNASFEH WLEFSGVSLL HVHAGIGWEG HEIARAGVAC GIPVIRTEHL PYLLTDAEQK
ERYARESDAL THHIVVSEAS KLSFESKGVK GNRMTVVRNG IFPLGARDIA GRSKVALGLD
GKSVLITVAR FSKQKDHATL IKAMPAVLAA DPSVVLLLVG KGEELEAVRA LVEDLSLGPH
VQFLGHRIEV DQLMGNADLF VLPSRFEGLP LAVLEAMSIG LPVVATRIGG TVEALGSEHP
FLAECEDPSS LARVLIEALS DPERAKTIGR AGRARFDTEF SARRMADETA AVYRRFLSER
TENKQGHHFM DKTRVGFIGV GGIAHRHLDI FAGFEDVALV AFADPDFARA EHAASRFGAK
AFESHSAMLE KEALDAVYIC IPPFAHGDAE RDLIARGIPF FVEKPITLDI ELAEELCAAI
EAAKLITAVG YHWRNLDTVE EARRLLAENP AQLLSGYWLD QTPPPQWWWK NDRSGGQMVE
QATHIIDLAR YLIGEVTDVY GRVGFKDRPE FPGLDVPAVT TASLTFQSGV IGNISSTCLL
GWSHRVGLNI FADRLAIELT DHDIMIDVGA GRPVRHAQGD PVWREDRDFV DAVRGGNNNI
RCAYADALAT HRLALAVASS ARSGEPIKLD PPAIVRNAVT TLQYPPSSEA CQGLSPGHRA
IRSLGIEGPG KAFFFDYQEG PPADGHVRLE TLFTGFSAGT ELTFMKNTNP YFHSRFDSER
GVFFENEPDL HYPVPFLGYM EVARVSESKA AGFKEGDVVA ATYAHKSGHT ADPFLDLLVP
LPAEIDPVLG VFVAQMGPIA ANGILHADAD ALGSNVSCLG VGVAGRHVVV LGGGTVGLMT
ALFAQKAGAL EIVVADPSAF RRNKARGMGL IAMTEDEVWQ HAKTRWHNGG SDRGADVVFQ
TRAHPWSLHV ALKALRPQGT VIDLAFYQGG AERLRLGEEF HHNGLNIRCA QINRVPRGLA
PLWNRRRLAE ETVQLLKIYG ALIREHMITH VVPFDDGPKF LADLVENRPE FLQIVFKVSG
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