| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5676 |
|---|
| Symbol | |
|---|
| ID | 5319978 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009621 |
|---|
| Strand | + |
|---|
| Start bp | 642526 |
|---|
| End bp | 643116 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640777406 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001314338 |
|---|
| Protein GI | 150377743 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.167511 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACGC CACAACGAAG GTTCGTTGTT GAATTCAAGT CGGGGCGACG ACAGCCAAAA
ACCAAAGCAA ACTCAATCTG GGGAGACACA GATCTCAGGG CTTTGGCCCG GGAAGTGGAA
GAGAAGGCGT CGCATCTGTT CAGTTCAAAT GAGGCACCGT TGACCCCTGA TTCAGCTGAA
ATGGGGCTGG CTGATTCGTC AAATGCGGCT TCTGCCAGCG AAGACGGCGG CGATGTCGCA
GTTGTGCCGT CCTCCGAAGG TGCAGAGACT GAAATCCTGA AGCATGCTGC CGATCTTTCG
GTGGCGGCCG AAGCTGTGGC TCAAGTGCCG GAGAGCCAAC CAGCATCCCA GCGTCGAACG
ACAACCGGCA CTCGTCGAAA GCGCGCCCCC GCCCAGGCGA TTGCGCACAA TTCGGAGCTT
GGGACCGAGG CTCGAAAGCC GCAGAACGGG ACTGTCGACA ATCCGATCTC CGTCGACGAG
CTTGCCACGC TGGACGCAGA CAACAAGCGC CTCAAGCGGT TACTGGCTGA ACAGCTTCGT
GAACAGAACC TTCGGCTGAA GAAGATGCTT GAACGCTTTG ACGCCAAATA G
|
|---|
| Protein sequence | MKTPQRRFVV EFKSGRRQPK TKANSIWGDT DLRALAREVE EKASHLFSSN EAPLTPDSAE
MGLADSSNAA SASEDGGDVA VVPSSEGAET EILKHAADLS VAAEAVAQVP ESQPASQRRT
TTGTRRKRAP AQAIAHNSEL GTEARKPQNG TVDNPISVDE LATLDADNKR LKRLLAEQLR
EQNLRLKKML ERFDAK
|
|---|
| |