Gene Smed_5674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5674 
Symbol 
ID5319976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp640930 
End bp641544 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content53% 
IMG OID640777404 
Producthypothetical protein 
Protein accessionYP_001314336 
Protein GI150377741 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.183741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAC CGTGGAAGTT CCTCGCGCAA TTGACGTCGC GTCGACCATC GTTGAAAGCG 
CAAGAGAGTT CGCTTGGGAA TGACGCTGAT CCCAAGGCTC ACGGGGGCGA AGTGGAGCAT
ACGTCCGCAC TTCCGCACAA TTCGACGATC GCTGCCAGCC CACCTGCTCG CGAGGAGGAC
GTCTCGATTG ATCAAGGGTC GGTCGCATTC GGGCATTCGG ATAAGACAAT AGGCGATGAC
GTTGTCTCAC AGGATCTGGA ACCGCCAATC GATGCTGAAG AGGCTCAAAC ACTGGGGCCC
TATGAAGCTA ACCATTTGGG TGCCGAAGCG AATTTGCTGG TTCCGCAAAG CGCTGCACGC
ACGAAGTTGG AGAGCAAGCA GCAGACCAAG CGTCGAGACC GTGGGAAGAG AGGCAACTTC
AACGTGGCTA AGCAGCGCGC TGTCGCTCCA AAGTATCATC AAAGCTTGCC ACCCTCGTCT
TCGAGTGACT TGTTTTTCGA TGAAGTGGCA AGTCTCGACG AAGAAATCAA AATTCTGAGG
ATCCAGCTCG CCCAAAAGCT TCATCTTCAG AACGTTCAGC TTAAGAAGAT GCTTGAGCGA
TTTGAAGTTT CCTGA
 
Protein sequence
MKAPWKFLAQ LTSRRPSLKA QESSLGNDAD PKAHGGEVEH TSALPHNSTI AASPPAREED 
VSIDQGSVAF GHSDKTIGDD VVSQDLEPPI DAEEAQTLGP YEANHLGAEA NLLVPQSAAR
TKLESKQQTK RRDRGKRGNF NVAKQRAVAP KYHQSLPPSS SSDLFFDEVA SLDEEIKILR
IQLAQKLHLQ NVQLKKMLER FEVS