Gene Smed_5670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5670 
Symbol 
ID5319972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp637129 
End bp637572 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content61% 
IMG OID640777401 
Productplasmid stability protein-like protein 
Protein accessionYP_001314333 
Protein GI150377738 
COG category[R] General function prediction only 
COG ID[COG4691] Plasmid stability protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGCGA CAGCTCCTCG GTTCTTGCCT GCACCTCCTG GAACAAACGT ACGTTTTCGA 
TCGCGATCGC TGCCAGGGTC AGCGAAAGTC GATGCCAGCT CGACTTGTTT CCCTGTGACG
GGACGTACCG TTGAGCGGGA CAATGCCAGC ACGCCGATTG GACTTCCTTC GCGCAAGAGC
GGCACGCCGA GCGCCATCCT GACAGTACGG AATGTTCCTG ATGAGGTGCA TCGCGCTTTG
CGCGTGCGGG CGGCGATGCA CGGCCGCAGC ACCGAGGCGG AAGTCCGCGA CATTCTGGAA
AGTGCGGTAA GGCCGGAGCA GCGGGTTCGC ATGGGGGATG CCTTGGCTGG GGTCGGCAGG
CGGCTGGGAC TGACCAATGA TGATTTCGCA GTGTTTGATG AGGTGCGTGA CAAGTCGCCG
GCAGAGCCAA TGAGGTTTAA ATGA
 
Protein sequence
MIATAPRFLP APPGTNVRFR SRSLPGSAKV DASSTCFPVT GRTVERDNAS TPIGLPSRKS 
GTPSAILTVR NVPDEVHRAL RVRAAMHGRS TEAEVRDILE SAVRPEQRVR MGDALAGVGR
RLGLTNDDFA VFDEVRDKSP AEPMRFK