| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5647 |
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| Symbol | |
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| ID | 5319949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 611579 |
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| End bp | 612658 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640777381 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001314313 |
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| Protein GI | 150377718 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.560781 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACGAC GCGACAAAGC ACAGGAGAAC CTTTCCCGGC TCGAAGAGGC CGCGCAACAG
ACTGCTGATC CAAAAACTAT GCAACAGAAG GCGAAAAGGC CGGAGGAAAA ATTTCGCTTC
AGCCTCCGCA AGAAAGACGT CTGGTGGACG GTTGGCTTGG CTGCGGTTGC CTTGCTGCTT
TTTGGCATCC AGATCCTGAT CAGTTGGCGC TTAGATTGGC TCGACGCGCC CTTGCGCCTC
CGCGTGATGA ACTACGTCAA GGGTGGCCTT CTCATTTTTA TTATGCTGAC CATTGCGAAT
GTTATTGAAG TCTTTCTCAT TGGCCGAATT CCCAATCGTG TCTCGCGTTT CAACCTGAAA
CGTATTTTTC GTTTGATCGT CGTGGTCGCC ATCGCCTTCG TGACGATTTC GGTCTTATTT
GTAAACTGGT ACGCCGCGTT CGTTTCGCTC GGCCTGATTT CTTTGATTCT TGGCTTTGCG
CTGCAAATGC CGATCTCCAG TTTCATCGCG TGGATCTATA TCCTCGCCAG GGCTCCTTAT
CGGGTTGGCG ATCGAATTCG CATCGGCGAT GCCCATGGCG ATGTCATTGA CGTCAGCTAT
CTCGATACGA CGCTGTGGGA ATTCGGCGGC GAGTACCTCT GGACCGATCA TCCGAGCGGA
CGCATCATCA AGTTTCCGAA CTCCACCGTC TTTGACACGC CGGTCTTCAA CTATTCCTGG
CCGCTGTTTC CCTACGTATG GAACGAAATC AAGTTCCAAC TCGCCTATAA CAGCGATCTC
GAGTTCGTGG CGCAAACCAT GAAAGAGGTC GTGGAAGAGC ACGTCGGCGA TATCATGAGC
CAGAAAGTGA AGGTCTATAG GCACATCTTA TCTAAAACGC CGGTGGACGA ACTCGAAGTG
AAGGAGCATC CCGTGGTTCA TTTTCGCGTC AGCGAAAACA CCTGGCTCGA GGCCATCGTG
CGTTATCTCG TGCCGCCAAA GGAAGCGGGA CGCACCAAAA CACGCTTGAT CACGGAAATG
CTGGCGCGAA TGAACGCAGA GCCCGATCGC GTGCTGTTTC CGAAGAGCAA TTTGAGGTGA
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| Protein sequence | MERRDKAQEN LSRLEEAAQQ TADPKTMQQK AKRPEEKFRF SLRKKDVWWT VGLAAVALLL
FGIQILISWR LDWLDAPLRL RVMNYVKGGL LIFIMLTIAN VIEVFLIGRI PNRVSRFNLK
RIFRLIVVVA IAFVTISVLF VNWYAAFVSL GLISLILGFA LQMPISSFIA WIYILARAPY
RVGDRIRIGD AHGDVIDVSY LDTTLWEFGG EYLWTDHPSG RIIKFPNSTV FDTPVFNYSW
PLFPYVWNEI KFQLAYNSDL EFVAQTMKEV VEEHVGDIMS QKVKVYRHIL SKTPVDELEV
KEHPVVHFRV SENTWLEAIV RYLVPPKEAG RTKTRLITEM LARMNAEPDR VLFPKSNLR
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