Gene Smed_5632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5632 
Symbol 
ID5319934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp598699 
End bp599121 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content57% 
IMG OID640777374 
Productresponse regulator receiver protein 
Protein accessionYP_001314306 
Protein GI150377711 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.653856 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGAG CTGGTTCATG CTTTCCGCAT GGGGCTCCAG AAAGGCATAA CTTGGAAAGC 
CCACCACGCG AAGTGGCTGT CGTGGAAGAC GATCCGAGCA TGCGGAAGAG CGTCGCGCGG
CTCCTGAACG CACATGGTTT TGCGACGGAG GTTTATGCGT CGGCCGAAGC CTTTCTGAGC
TGCGCCAGTC AAAACCGGTT TGGTTGCATT GTCCTCGACA TTCATCTCAG CGGCATGTCT
GGCATCGAAC TGTGGCACCG ACTGAAAGAC ACCGATTTCC GGATCAAGGT CATCTTCATC
ACGGCCTTGG ACGATGGGGT GCTCGAAGCG GAGGCGATGA AAGCGGGATG CGTGGCGTAT
CTTCACAAGC CATTTCCGGC CGACGCTCTG ATCGGAGCTG TCAACAGAGC ATTGGGTGCT
TAG
 
Protein sequence
MIGAGSCFPH GAPERHNLES PPREVAVVED DPSMRKSVAR LLNAHGFATE VYASAEAFLS 
CASQNRFGCI VLDIHLSGMS GIELWHRLKD TDFRIKVIFI TALDDGVLEA EAMKAGCVAY
LHKPFPADAL IGAVNRALGA