| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5611 |
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| Symbol | |
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| ID | 5319913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 579229 |
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| End bp | 580551 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640777355 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001314287 |
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| Protein GI | 150377692 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00900] H+ Antiporter protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.358621 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCAGG TCCTTGCCAA CTACACCTAC CGCCACCTGT TCCTGGCACA GGTGATCGCG
CTTATCGGCA CGGGTCTCGC CACCGTCGCG CTCGGACTTC TCGCCTATGA ACTGGCAGGA
GCAGAGGCCG GCGCGGTGCT CGGCACTGCA CTTGCCATCA AGATGATCGC CTATGTCGGC
GTCGCCCCCG TCGCGGCCGC CTTTGCCGAA CAACTTCCCC GCCGTACGAT GCTCGTTTGC
CTCGATCTCG CGCGTGCAGC CGTTGCATTG TTCCTGCCCT TCGTGACCGA GGTCTGGCAG
GTCTACGTCC TGATCTTTGT GCTACAGTCG GCATCCGCCG CCTTCACGCC GACTTTCCAG
GCGACCATTC CGGACGTCCT GCCGAACGAG AAGGAATATA CCCGCGCCCT GTCGCTGTCG
CGGCTTGCCT ACGATCTCGA AAGCGTCGCA AGTCCGATGC TGGCAGCCGC GCTTCTGACC
GTGGTCAGCT TCCACAGCCT GTTTGTCGGA ACGGTAATCG GCTTCCTCGC ATCGGCGGCC
TTGGTTGTCT CGGTCGTGCT TCCGAGCCCC ACGACGTCGG ACCGCCGCGG CATCTATGAT
CGTACGACGC GTGGCCTGCG CATCTATCTC GCCACGCCAC GCCTGCGCGG CCTGCTCGCC
CTTAGCCTCG CGGTCTCGGC GGCAGGATCG ATGGTCATCG TCAACACCGT CGTGCTGGTC
CAAGCGGAAT TCGGCCTCAC TCAGCGTGAC ACCGCCGTGG CGCTTGCGGC GTTCGGCGTC
GGCTCAATGA TTGCCGCCCT GCTGCTGCCG CGACTGCTCG ACAACATGCC GGACCGCACT
GCGATGCTGG CGGGGGCCGT CGTTCTCGTC GCCGGACTGT TCGTCGGTGT GTTCGTACCG
AGATTCGCTC TGCTGCTGCC GCTGTGGCTG GCAATCGGCG TCGGCTATTC GCTTACGCAG
ACGCCGTCCG GAAGGCTCCT GCGCCGGTCG TCGAGTCCGG AAGACAGACC CGCGCTGTTT
GCGGCTCAGT TCGCCCTGTC GCATGCCTGC TGGCTGATCA CCTATCCACT CGCCGGATGG
CTTGGCGCAA CGGTTGGCCT GCCAGCGACT TTCTCCGCGC TCGGGGTGAT CGCCGCCGCC
GCCATCTTCG TCGCCACTCG GCTCTGGCCG GCGGACGATC CCGAGGAAAT CGAGCATGTC
CACGACGACC TTGCCGCGGA CCACCCGCAT CTTGCCGACG CCGAGCGTGT CGGCGATGGA
CACAGACATA GCCATGTCTT CGTCATCGAC AGCCATCATC CCGATTGGCC GACCGAGCGA
TGA
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| Protein sequence | MLQVLANYTY RHLFLAQVIA LIGTGLATVA LGLLAYELAG AEAGAVLGTA LAIKMIAYVG
VAPVAAAFAE QLPRRTMLVC LDLARAAVAL FLPFVTEVWQ VYVLIFVLQS ASAAFTPTFQ
ATIPDVLPNE KEYTRALSLS RLAYDLESVA SPMLAAALLT VVSFHSLFVG TVIGFLASAA
LVVSVVLPSP TTSDRRGIYD RTTRGLRIYL ATPRLRGLLA LSLAVSAAGS MVIVNTVVLV
QAEFGLTQRD TAVALAAFGV GSMIAALLLP RLLDNMPDRT AMLAGAVVLV AGLFVGVFVP
RFALLLPLWL AIGVGYSLTQ TPSGRLLRRS SSPEDRPALF AAQFALSHAC WLITYPLAGW
LGATVGLPAT FSALGVIAAA AIFVATRLWP ADDPEEIEHV HDDLAADHPH LADAERVGDG
HRHSHVFVID SHHPDWPTER
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