Gene Smed_5606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5606 
Symbol 
ID5319908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp575258 
End bp576148 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content61% 
IMG OID640777351 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001314283 
Protein GI150377688 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.854506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.639909 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGCAC CGGCATCCGA ATCCAAGTTG ATCGACAGCT TCAAAATGCA TGTGGCCACA 
ATCGAGAGCG CCGATCTCGA GCAGTTGCAT GCCTTGTCCG TTTCCGTCGG GTGGCCTCTG
CGCTCCGAGG ATTTGCAGTT TCTGCGCGAG TGCGGCCGCG GCTATGTCGC ACGCGACGAC
ATTGGCAGGC TAACAGGTTC GGCCATGTGG TTCCCACATG GCGACGATTT CGCCACCATA
GGCATGGTGA TCACTTCCCC GCGTCTGCAG TCAAACGGCA CCGCACGCTG GCTCATGGAA
CACGTGCTTC GGGATTGTCT GGGACGCAAC CTCAGACTCA ATGCAACGAG GGCCTCCCGC
CGTCTGTATC ATTCGCTCGA TTTCAAGCCC ATGCGGACCA TTTACCAATG CCAGGGCATC
GTCCGCCCGG CCGACTCGAC GACTACGACG GAGCAGCCAC CGGTCAGGCG ACTGGAAGGC
GAGGACCTTG TCGCCGTCGC TGAGCTGGAT GCAGGGGCAT TCGGCGTTTC AAGGGCGGCT
CTGATCGGCA AACTCTTCAC GCAATCGGTC GGCTACGGCC TGTTTCGTGG CGATCGGCTG
CAAGCTTTCG CGCTTTGTCG TCCCTTTGGC AGGGGCCATG TCGTGGGCCC GGTCGTTGCG
GACTCCAATG CCGACGCTAT CGCAGTTATC CGACCGCATG TCGCCGCCAA AGAAAACCAG
TTTCTGAGGC TCGACACCCC GATCGAGACC GGCCTTTTCG CGACATTTCT CTCCCAATCC
GGCCTAGCCG TCTTCGATAC GGTACTCGCA ATGTCGCGTC CGGGCAAAGG CCGCGCCGAC
GTAGTACCAG GACCAAACCT CTACGGCTTG GCAAGTCACG CCCTCGGCTG A
 
Protein sequence
MDAPASESKL IDSFKMHVAT IESADLEQLH ALSVSVGWPL RSEDLQFLRE CGRGYVARDD 
IGRLTGSAMW FPHGDDFATI GMVITSPRLQ SNGTARWLME HVLRDCLGRN LRLNATRASR
RLYHSLDFKP MRTIYQCQGI VRPADSTTTT EQPPVRRLEG EDLVAVAELD AGAFGVSRAA
LIGKLFTQSV GYGLFRGDRL QAFALCRPFG RGHVVGPVVA DSNADAIAVI RPHVAAKENQ
FLRLDTPIET GLFATFLSQS GLAVFDTVLA MSRPGKGRAD VVPGPNLYGL ASHALG