| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5598 |
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| Symbol | |
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| ID | 5319900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 565813 |
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| End bp | 566481 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640777343 |
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| Product | haloacid dehalogenase, type II |
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| Protein accession | YP_001314275 |
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| Protein GI | 150377680 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.789789 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCT TCCGTCCGAG ATACATCACC TTCGACTGCT ATGGCACGCT GACCAACTTC
CAGATGGCGG AAGCGGCGCG CGACCTTTAC AGCGAACAGC TCGACGAGTC GCGCATGGCG
GAATTCATCA AGAATTTCGC CGCTTACCGA CTTGACGAGA TCCTCGGCCA CTGGAAGCCC
TATGCGGAGG TGGTGCACAA TTCGCTCGAA CGGACCTGCA AGCGCAATGG CATGAAATTC
CGCGAGGAAG CGGCGCGCCT GGTCTATGAA CGCGTCCCGA CCTGGGGTCC GCATCCCGAC
GTGCCTGCCG GTCTTGCCAG GGTCGCCAAG GAGATCCCGC TTGTCATCCT GTCCAACGCG
ATGAATTCGC AGATCATGTC GAATGTCGAG AAGCTCGGCA CTCCTTTCCA TGCGGTCTAC
ACCGCCGAAC AGGCGCAGGC CTATAAGCCG CGCTTCAAGG CGTTCGAATA CATGTTCGAC
ATGTTGGGCT GCGGTCCGGA GGATATTCTC CATTGTTCAT CGTCCTTCCG CTACGATCTA
ATGTCGGCGC ATGACCTCGG CATCAAGAAC AAGGTCTGGG TCAATCGCGG TCACGAGCCG
GCCAATCCCT ATTACGGCTA CGTCGAAATC GCCGACATTT CCGGCCTGCC GGGCGTCGTC
GGTCTTTAG
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| Protein sequence | MTTFRPRYIT FDCYGTLTNF QMAEAARDLY SEQLDESRMA EFIKNFAAYR LDEILGHWKP
YAEVVHNSLE RTCKRNGMKF REEAARLVYE RVPTWGPHPD VPAGLARVAK EIPLVILSNA
MNSQIMSNVE KLGTPFHAVY TAEQAQAYKP RFKAFEYMFD MLGCGPEDIL HCSSSFRYDL
MSAHDLGIKN KVWVNRGHEP ANPYYGYVEI ADISGLPGVV GL
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