| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5569 |
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| Symbol | |
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| ID | 5319871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 534681 |
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| End bp | 535598 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640777317 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001314249 |
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| Protein GI | 150377654 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0364819 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGGC TTGATGCAAT GCGGGTTCTG CTTGCGGTGG TTGACGCCGG GAGCTTGTCG
GCGGGCAGCC GGAAGCTGAA TGCGCCGCTG CCGAGCGTAA GCCGCAAGGT CGCCGATCTG
GAGCGATATC TCGGCGCAAA CCTCATCATC CGAACAAGCC GCAACCTGCA GCAGCTTACC
GACGCCGGCC GCGACTATGT CGATGCGGCA CGCAAGATCA TCGCCGATCT GGACGAGGTC
GAACGCAGGG CCTCAGGCGA ATATCAAAGG CCACGGGGAC TGCTCACCAT CACGATGCCT
ATCGAGTTTG GCCACCGGTA CGTTCTGCCG ATCGCACTCG ACTTCATGAA CGAGCATCCG
GAGGTGACTT TGAACCTCCT GTCCCTCGAC CGTTCTGTTC ATCTCGCCAA CGAGCAGGTC
GACGTCGCCA TCCGACTTGG CGAGTTGGCC GACAGTACGC TCTACGCCGT CAAGGCCGGC
GAGTTCCGCC TGTTGACCTG CGCAAGCCCG GCCTATCTCG AACGGCATGG CGTTCCCCAC
CATCCCACAG AGCTCACCAA GCATGACGGA ATCATGTTCC ACAACCGGTC GTTCTTCTGG
AGTTTCGAGG TCGACGGGAA GTCTGTCGAG GCGATGCCAC GCAGCCGAAT CGAAGTCAAC
ACGGCGGCCA GTTGCGTCAC GGCCGCCCGA AATGGAGCCG GGATCGCCCG CCTCTTCGAC
TACCAGGTTC CGGAGGAAGT GTCCTCGGGC GCGCTCGTGC AGATCTTGAG GGAGTACGGC
GGTAGGCCCA AGCCGATCCA CATCGTCTAC TCGCGTCAGG GGCTACTCGC TCTCAAAGTG
CGTGCCTTCA TCGATTGGAC GCTCCCCCGG CTTCGCGCCG CTTGCAGCAA GTATTGCGAT
GCGCCGTCAC CGGAATGA
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| Protein sequence | MDRLDAMRVL LAVVDAGSLS AGSRKLNAPL PSVSRKVADL ERYLGANLII RTSRNLQQLT
DAGRDYVDAA RKIIADLDEV ERRASGEYQR PRGLLTITMP IEFGHRYVLP IALDFMNEHP
EVTLNLLSLD RSVHLANEQV DVAIRLGELA DSTLYAVKAG EFRLLTCASP AYLERHGVPH
HPTELTKHDG IMFHNRSFFW SFEVDGKSVE AMPRSRIEVN TAASCVTAAR NGAGIARLFD
YQVPEEVSSG ALVQILREYG GRPKPIHIVY SRQGLLALKV RAFIDWTLPR LRAACSKYCD
APSPE
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