| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5556 |
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| Symbol | |
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| ID | 5319858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 522258 |
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| End bp | 524372 |
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| Gene Length | 2115 bp |
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| Protein Length | 704 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640777305 |
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| Product | hypothetical protein |
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| Protein accession | YP_001314237 |
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| Protein GI | 150377642 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1649] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.204862 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0475652 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCATC GACCAAACGC AATCACCGGT TCCACCGCCC GTTCGCCTGA ATGGTACAAG
TCGGCCACCC GCTGGACGCA ACTGACTTTC GCGGAAGATG ATCCGGACAA ATATGATCCG
GAATTCTGGA TCGACGTGTT CCGGCGCACG AAGTCGAACG CGGTGTGCCT TTCGGCTGGC
GGCTACATCG CCTATTATCC GAGCGAAATT CCGCTGCATT ACGTATCGAA GTTTATCGGC
GGAACCGATC CGTTCGGAAC CATCGTCGAG GGCGCACGTA AACTCGGCAT GCATGTCATG
GCGCGCGTCG ATCCGCATGC GATCCATGCG GATGCGGCAG AGGCGCATCC GGAGTGGGTG
GCGATCAACC GGGACGGCAG CCCGCGCGAG CACTGGGCAT ACCCCGGCAT CTTCGTCACC
GACGCACTCG GAAGCTACAA CCGCAATTTC ACCACCGACG TCATCCGTGA GATTGTCGCC
AAATACGATA TCGACGCAGT GTTCGCCAAT CGCTGGCAGG GGCATGGCGT CTCCTATAGC
GAAGACAATC AGCGACGATT CCGGGACGAA ACGGGCTACG ACCTGCCGGC GAAGGCAGAT
GCCAGAGATC CTGCTTGGCA GGCATGGGCC GCATGGCGGA GACGGATCCT GACGGACCTC
GTAGTCCACT GGGACGAAAC CGTGAAGTCC ATCCGCCCTC ACGCCAGCTT CATTCCTAAC
ATGAGCGGCT CGTCACTGAT GGAATTCGAC CTGTCGCTCA TCCAGAAGCA TTGCCCGATC
CTCTTCGTCG ATCATCAGGC GCGCCAAGGT ATTGAGGTCG GCTGGTCGGC CGGCCGCAAC
GGCAAGCGCA TTCGCGGCAC ATTTCGTGAC CGCCCGGTTG GGCTGATCAC CTCCATCGGG
CCGGAGGAGG AATATCGCTG GAAGGATTCC GTCCAGAGTG GGGAGGAAAC CAAGCTGTGG
ATCCATGACG GCATGGCGCA GGGCCTGTTT CCCTGGTTTA CCAAATTCAA TGCCTGCGTT
CCGGACGATC GATGGGTTCA GCCTGTCGTG GATGCGTTCA ATCTTCATGC GGACATCGAA
CCGCAGATCG ACGGAATGGC GCCGACGGCC GAAATTGCCA TCATCGATCC GTCGACGACG
CTGCGGCACT GGGCACCGGA AGAACGGCAC ATCGCCGAGC ACAATGATCT CGGATTCTAT
CACGCGCTGG TGGAAGCGCG CATTCCATTC GAATTCCTCT CGGACCAGGT GATGACAGCC
GAAGCGCTGG ATCGCTTCAA GCTGATCGTG CTGGCAAACG CAACCTATTT GTCCGACGCG
CAATGCTCTG CCATCGAAGA GTATGTCAAT CGCGGCGGTT CGGTCGTCGC GGCAAACGAG
ACCTCCCTCT ATGACGAAGT GGGAAGGCAA AGGAGCGATT TCGGGCTGGC ACGGGTCTTC
GGCGCAACGC TGACATCGGC TCCCCGTGGT CCGGTGAAGA ACACCTATGT CGCACTGTCC
AACCCGCATC CGTTGAACCG GGGTTACGAG GGAGCCACTC GCATAATTGG CGGGACACGC
CTCATTGCCG TCGATGCGGA TGCGAAGGCA GAGACGCCGT TCCTCTACAT CCCCGATTTC
CCCGACCTGC CGATGGAGGA AGTCTATCCG CGCGAAGCGC CGGAGGGGGC TGCCGTCGTC
GCACGCGAGA CCGGCCACGG CGGCCGTGTT GTCTACATCC CGTGGAATAT CGGCGAGGTC
TTCTGGAAGG TTCTTGCCCC TGATCACGGG CGGCTGATCG CCAACGCCGT CAACTGGGCC
ATGGGTAGGG ATCATCGGGT TCGGGTGGAA GGCAAGGGGA TCATCGACAT CGCCGTTTAC
GAGAGGGACG ATGCGACGGC GATCTTCCTC GTTAATCTCA CCAACCCAAT GATGATGAAG
GGACCCCTTC GTGAGGTCTA TCCGATCGGC AAGCAGACGG TGTCCGTTGC GATGCCGAAG
GGTCGAAGGT CGGCCTCGGC GAAGCTGCTG GTCAACGGCG ATAAGTGTGA GTGCTGCATC
GTCGGCGATC GGGTCGAGAT CCAGGTGCCG TCCATTGAGG CGATCGAAAC CGTTCATATC
ATCTGGCAGT CGTAA
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| Protein sequence | MLHRPNAITG STARSPEWYK SATRWTQLTF AEDDPDKYDP EFWIDVFRRT KSNAVCLSAG
GYIAYYPSEI PLHYVSKFIG GTDPFGTIVE GARKLGMHVM ARVDPHAIHA DAAEAHPEWV
AINRDGSPRE HWAYPGIFVT DALGSYNRNF TTDVIREIVA KYDIDAVFAN RWQGHGVSYS
EDNQRRFRDE TGYDLPAKAD ARDPAWQAWA AWRRRILTDL VVHWDETVKS IRPHASFIPN
MSGSSLMEFD LSLIQKHCPI LFVDHQARQG IEVGWSAGRN GKRIRGTFRD RPVGLITSIG
PEEEYRWKDS VQSGEETKLW IHDGMAQGLF PWFTKFNACV PDDRWVQPVV DAFNLHADIE
PQIDGMAPTA EIAIIDPSTT LRHWAPEERH IAEHNDLGFY HALVEARIPF EFLSDQVMTA
EALDRFKLIV LANATYLSDA QCSAIEEYVN RGGSVVAANE TSLYDEVGRQ RSDFGLARVF
GATLTSAPRG PVKNTYVALS NPHPLNRGYE GATRIIGGTR LIAVDADAKA ETPFLYIPDF
PDLPMEEVYP REAPEGAAVV ARETGHGGRV VYIPWNIGEV FWKVLAPDHG RLIANAVNWA
MGRDHRVRVE GKGIIDIAVY ERDDATAIFL VNLTNPMMMK GPLREVYPIG KQTVSVAMPK
GRRSASAKLL VNGDKCECCI VGDRVEIQVP SIEAIETVHI IWQS
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