| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5555 |
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| Symbol | |
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| ID | 5319857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 520226 |
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| End bp | 522154 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640777304 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001314236 |
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| Protein GI | 150377641 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.140103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0740019 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGAAT TCAGCCGTCG CGCGTTTCTC TTTTCGAGCA CCGCCGCCGT TCTACTGCCT
GTAATGCCAA TGATTGCACT GGCCAACTCG GCCAAAGAGC CTGCCATGTT GGAGGCGCTG
GCCAAGACGG GCAGCCTGCC AGCCGTTGCG GACCGCTTGC CGCTCAACCC GATGGTCGTC
ACCCCGCTGG ATCGGGTGGG GACCCATGGA GGCGACTGGA ACAGTGCAAT CGTTGGCGGG
GGATCCCTGT CGATGTTGTT CCGCTATCAG GCTTACGAGC CTCTGTTAAG GTATGCGCCG
GATTGGTCGG GCGTGGTGCC AAACGTTGCC GAACATTACG AAAGCAATGC CGACGCGACT
GAGTTCACGT TCAGGCTGCG CAAGGGCATG AAATGGTCGG ATGGCGAGCC CTTCACCACG
GAAGACATCC TGTTCTGGTA CGAGGATATC TTCAACTACG AGGGGCTCAA CGATGTCGGG
CAGAACCATC TGCGCGCCGG AGGCAAGAAG GCGCGCTTCG AAGCTGTCGA CGACGTCACG
TTCAAGGTGA TCTTCGCAGC ACCCAATGGA CTTTTTCCCC TCCGGCTCGC ATGGGCGAAC
GACGATCAGA CGACGCGGGC ACCGAAGCAT TACCTCAAGC AGTTCCACAT CAAGTACAAT
CCAAATGCCG AAGAGGAAGC CAAGACCAAG GGCGCCTCGG GATGGATCCA GCTTTTCCAG
CGGGAAGCTG GTCTCGTCGT AGACAACGAA TTCTTCCAGA ACTCGCAGCG CCCGGTCATT
CATGCCTGGA AGGTGGCCAT CGCGCCCGGT CAGAGTACCG ACCGTGCCGT TGCCGAGCGA
AATCCCTACT ACTGGAAAGT CGATACCGAG GGCAATCAAC TGCCTTATCT GGATCGGATC
GTCTACCAGA TGGTTTCCGA TCCGCAGGTC CTACTTCTGA AGGCGATGCA GGGCGAGATC
GATTTGATGG ATCAGTATAT TGCCACGCCT GCCAATCGTG CCGTGCTGTA CGATTCCCAA
GAGCAGGGCA GATTTGGATT CTACACGCTG ACCTCAACCG AAACAAACGA GATGGTTTTC
CAGCTCAATC TCAACCACCC CAATGAGGTG AAGCGCAAGC TCTACAACAA CAAGGACTTC
AGGGCAGCGC TCTCAATGGC GCTCGATCGC CAGGCCATCA TCGATACCGT GTTCATCGGA
CAGGGAACGA TCTCGCAGCC TGCCGTGCGA GCGGACGATC CGCTCTACAA CGAACGCCTC
GCAACGCAGT ACACGCAATA CGACCCCAAT CGCGCCAACG CTCTCCTGGA CAAGATCCTG
CCGAGCAAGG ATAGTGAAGG TTTCCGTCTC GATGAAGGCG GAAAACGGGT ATCGATCATT
TTTGAAATCG ATCAGGCGCG CGCCACCTTC CTCGACATCT TCCAACTTGC TCTGCCGATG
TTCCGGGCTG TCGGCGTTGA TGTCCAGATG AGAAGCATGG ACCGCTCGCT TTGGGAAGTG
CGCGTGCGGC AGGGTATCGA GTATGACGCG ACAGCCCATC GCTTTGGCGG CAATGGCGGC
ATCGCGGCAA TCCTTGACCC GCGTTATTTC ATTCCCAATA CGACAGAAGC GCTGTACGCG
AAAGGTTGGC AACTCTGGTA TCGAGATTCG CAATCCCAGG GTGCGGTGGA GCCACCGCAG
CCCGTCAGAA ACGCCTTGGC TCTCTACGAT CGGGTGCTCG CTTCGGCCGA TCCCGATGTG
CAAAAGAAGC TCATGGCCGA GATTCTGGAG ATCGCTGCCG ACCAGTTCTA TGTGTTCGGA
ATCTGCCTGC CCGCCGACAG CTATGGGGTG GTTAAAAACG ACATGCAGAA CGTCCCCGAG
GCGATGCCGA ACTCCTGGGG ATATCCGACG CCCGGACCTG TCAATCCCGA GACTTTCTTC
AAGGTCTGA
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| Protein sequence | MQEFSRRAFL FSSTAAVLLP VMPMIALANS AKEPAMLEAL AKTGSLPAVA DRLPLNPMVV
TPLDRVGTHG GDWNSAIVGG GSLSMLFRYQ AYEPLLRYAP DWSGVVPNVA EHYESNADAT
EFTFRLRKGM KWSDGEPFTT EDILFWYEDI FNYEGLNDVG QNHLRAGGKK ARFEAVDDVT
FKVIFAAPNG LFPLRLAWAN DDQTTRAPKH YLKQFHIKYN PNAEEEAKTK GASGWIQLFQ
REAGLVVDNE FFQNSQRPVI HAWKVAIAPG QSTDRAVAER NPYYWKVDTE GNQLPYLDRI
VYQMVSDPQV LLLKAMQGEI DLMDQYIATP ANRAVLYDSQ EQGRFGFYTL TSTETNEMVF
QLNLNHPNEV KRKLYNNKDF RAALSMALDR QAIIDTVFIG QGTISQPAVR ADDPLYNERL
ATQYTQYDPN RANALLDKIL PSKDSEGFRL DEGGKRVSII FEIDQARATF LDIFQLALPM
FRAVGVDVQM RSMDRSLWEV RVRQGIEYDA TAHRFGGNGG IAAILDPRYF IPNTTEALYA
KGWQLWYRDS QSQGAVEPPQ PVRNALALYD RVLASADPDV QKKLMAEILE IAADQFYVFG
ICLPADSYGV VKNDMQNVPE AMPNSWGYPT PGPVNPETFF KV
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