Gene Smed_5543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5543 
Symbol 
ID5319845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp506613 
End bp507074 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content58% 
IMG OID640777294 
Producthypothetical protein 
Protein accessionYP_001314226 
Protein GI150377631 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.124836 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACCC AACTTTCGGA GATTGAAGGC GTCGAGCTCA AATCCGGAGA CGGCGGCCCC 
CTCGATGTCC TGATCGATTT CTACCGGGCC TTCAACGCCG GCGATCTTCG GGGCTTGGAA
TCCGTGTGGC TTGCAGGCGA GGCCCCGAGC ATGGACAACC CGATCGGCGG CATCCGTCGG
GGCTGGATTG CGATCGAGGA GGGCTATTCC AAGCTCTTCA GCGGACCTGC AAAGGTCCAC
GTCACCTTTC ATGACTTTAC GAGTCAGGGA GGACCCGATT GGCATCTCTT TGTCGGAAGA
GAGCGTGGCA AGTGCGTTAC CGCGGACAAA GAGCTGGAGA TCGCATTTCG AACGACGCGT
TGGCTCGTCA GACTTGATGG TTCCTGGCGG CAGCTCCATC ACCATGGCTC GGTTGAGGAC
GCGGATATGC TTCGCGATTA CCAGCGTCTG ATTTTTGGCT GA
 
Protein sequence
MKTQLSEIEG VELKSGDGGP LDVLIDFYRA FNAGDLRGLE SVWLAGEAPS MDNPIGGIRR 
GWIAIEEGYS KLFSGPAKVH VTFHDFTSQG GPDWHLFVGR ERGKCVTADK ELEIAFRTTR
WLVRLDGSWR QLHHHGSVED ADMLRDYQRL IFG