| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5526 |
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| Symbol | |
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| ID | 5319828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 492501 |
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| End bp | 493454 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640777279 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001314211 |
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| Protein GI | 150377616 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.77187 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGCA TTGATGCGAT GAAGGTCTTT GTCACTGCCG TGGAGGAGGG GAGCCTAGCC
GCTGCCGCCA GGAAGTTGAA GCGTTCGCCC ACTGCGATCA GCCGGGCGCT CGGTCTTCTC
GAAGAGCGCG TGGGTGTCGA ACTTCTCCAC CGCACGACGC GAAGCCTGAA GCTCAGTGAG
GCGGGGCAGC GTTACGTGGA AGTGTGCCGC AGGGTTCTCG TGGACCTCGA AGAAGCAGAT
ATCATTGCCG GAGGCGAGCG GTCGTCGCCA CGCGGCGTGC TGACAATCTC CGCGCCTCCC
ATCCTCGGGG AGGAGGTGCT TCGGCCGATT CTCGACAAGT TCCTGAAACA GCATTCCAGT
GTGTCCGTCC GACTGTTGAT GCTCGACCGT TTTGTCAATC TGGTCGATGA GAGGGTTGAT
ATTGCGCTCC GGATAGGCAA CCTCACGGAC TCAACGCATA TTACGACCCG GATCGGCGGC
GACGTCCGAC GTGTCGTCGT AGCGTCACCT GACTATCTCG CAAATCGTAA TGCAATTCGA
GAACCAGGTG ACCTCCTGCA GCACGACATT ATCGCATTCT CGAATTTTGG GATCGGTTCC
TGGGCCTTCA GCCCGGTCGG CCAAGGTACA ATCCCCAGAA CCGTGCATTT CTCACCGAGG
TATGTCGTGA ATAGCGTGCG TGCGGCCGCG GCGTCGGCCG CTGGGGGGAT GGGCGTAACG
CGACTCTATT CATATCACGT CGCTGAACTT GTCCGAGATG GAGCCTTGAA GATAATACTC
TCCGAGTATG AGCCGTCAGC GCTTCCCGTC CACCTTCTGA CACCGCAGGG AAGAATTTCC
GTACCGAAGG TTCGGGCTTT CATCGATTTT GCAGGTCCGA AACTAAAAGC AGCGCTTGCG
AAAATCGCGG CAGAGTCAGG AGCCTTAGCG CAAATTATGC CGAAAATCGG TTGA
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| Protein sequence | MDRIDAMKVF VTAVEEGSLA AAARKLKRSP TAISRALGLL EERVGVELLH RTTRSLKLSE
AGQRYVEVCR RVLVDLEEAD IIAGGERSSP RGVLTISAPP ILGEEVLRPI LDKFLKQHSS
VSVRLLMLDR FVNLVDERVD IALRIGNLTD STHITTRIGG DVRRVVVASP DYLANRNAIR
EPGDLLQHDI IAFSNFGIGS WAFSPVGQGT IPRTVHFSPR YVVNSVRAAA ASAAGGMGVT
RLYSYHVAEL VRDGALKIIL SEYEPSALPV HLLTPQGRIS VPKVRAFIDF AGPKLKAALA
KIAAESGALA QIMPKIG
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