| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5519 |
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| Symbol | |
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| ID | 5319821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 484148 |
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| End bp | 485440 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640777273 |
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| Product | epocide hydrolase domain-containing protein |
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| Protein accession | YP_001314205 |
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| Protein GI | 150377610 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCAGA TACAGGCACA GGTGACCCGT CGAACTCTTC TTGCTGCGGC CGCGACCGCA
GGCGCGGTGG GGATGGTTCC CCAAGCTTTT GCCGCCACCG AGGCTCCGGT GATCAAGCCG
TTCAAGTTCA GGGCTACCGA TGAACAGCTG ATTGATCTCC ATCGCCGGGT GGCAGCCACC
CGTTGGCCGG ACGAGGAAAA CGTAGCAGAC GACTCCCAAG GGGTGCGTCT CGAAACGATA
AAGAAGCTCG CGAAGCACTG GAAACACCAT GACTGGCGCA ACGTCGAGGC CCGCCTCAAC
GCGTTTCCGC AGTTCACGAC GGAGATCGAC GGACTCGACA TTCACTTCAT CCATGTGAAG
TCGAAGCATG AAAACGCGCT ACCGATCATC ATCACCCATG GGTGGCCAGG CTCCGTGATC
GAGCAGCTGA AGATCATAAA GCCCCTGACC GATCCGACCG CCTATGGCGG CACCGAAGCA
GACGCCTTCC ACGTCGTTAT TCCGTCCCTC CCCGGCTACG GCTTTTCCGG CAAGCCTCGG
GAGACCGGGT GGAACCCGCC GCGGATCGCG AAGGCCTGGG CCGTGCTCAT GGAGCGTCTG
GGATATACGA AGTACGTCGC CCAGGGCGGC GACTGGGGTA ACGCGGTGAC TGAACTCATG
GCCGTCCAGC AGCCCCCTGG CCTACTCGGC ATACACACGA ACATGGCCGC CACCGTTCCG
GCCGAGATTT CGAAGTCCTT GGCCGCAGGA ACGCCCCCGG AAGGCTTGTC TGCCGACGAA
AGGCGGGCGT GGGATCAGCT CGACGATTTC AACAAGAATG GCCTCGGCTA CGCTATCGAG
ATGAACAACA GGCCGCAGAC ACTCTACGGC ATCGTGGACT CGCCGATCGG TCTTGCGGCG
TGGATGCTCG ACCACGACAT CCGCAGCTAC CGCATGATCG CCAGGTCGAT TGACGGAGAA
AAAGAGGGCC TTAGCCCTGA CGACGTCCTC GACAACGTTT CCCTGTACTG GCTGACAAAC
ACGGCAATTT CTTCCGCGCG TCTTTATTGG GACAATGCCC ATCATCCGAG CGGCGGCTTC
TTCGACCCCC GCGGCATCAA GATCCCCGTC GCTGTCAGTG CGTTTCCGGA CGAAATCTAC
CAGGCGCCGC AGAGCTGGGC AAAGAAGGCA TATCCGAAGC TCATCCACTA CAACCGCCTG
CCGAAGGGCG GCCACTTCGC AGCCTGGGAG CAGCCTGCGC TTTTCACCTC GGAACTCCGT
GCCTCATTCA AGTCGCTTCG CGACCAGATT TGA
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| Protein sequence | MSQIQAQVTR RTLLAAAATA GAVGMVPQAF AATEAPVIKP FKFRATDEQL IDLHRRVAAT
RWPDEENVAD DSQGVRLETI KKLAKHWKHH DWRNVEARLN AFPQFTTEID GLDIHFIHVK
SKHENALPII ITHGWPGSVI EQLKIIKPLT DPTAYGGTEA DAFHVVIPSL PGYGFSGKPR
ETGWNPPRIA KAWAVLMERL GYTKYVAQGG DWGNAVTELM AVQQPPGLLG IHTNMAATVP
AEISKSLAAG TPPEGLSADE RRAWDQLDDF NKNGLGYAIE MNNRPQTLYG IVDSPIGLAA
WMLDHDIRSY RMIARSIDGE KEGLSPDDVL DNVSLYWLTN TAISSARLYW DNAHHPSGGF
FDPRGIKIPV AVSAFPDEIY QAPQSWAKKA YPKLIHYNRL PKGGHFAAWE QPALFTSELR
ASFKSLRDQI
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