| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5517 |
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| Symbol | |
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| ID | 5319819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 482863 |
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| End bp | 483519 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640777271 |
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| Product | isochorismatase hydrolase |
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| Protein accession | YP_001314203 |
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| Protein GI | 150377608 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1335] Amidases related to nicotinamidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.843237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCATC TGACCGTTCC CTTCGATGTC ACCAACACAG GGCTGCTGGT GGTCGACCCT
TACAACGACT TCATCTCCGA AGGCGGCAAG ATCTGGTCCC GGATCCAGTC CGTCGCAGAA
GCCAACAACT GCGTCGAGCA TATGGCGCAG ATCCTGCAGG CGGCGCGCGA GGTAAAGATG
CCCGTCTTCT TCGCCATGCA TCATCGCTAT CGCGAGGGCG ACTACGAGAA CTGGAAATAT
ATCGCGCCTA TTCAACGTGC CGCCTGGCAC CGAAAGAGCT TTTCATACGG CACCTGGGGC
GGTGAGTTCA GGGCGGAATT CGTGCCTGCC GCTGGCGAGA GCGTCGCGCA GGAACATTGG
TGCTCGAGCG GATTTGCAAA CACCGATCTC GACAATCTGC TCAAGCGCCG CGGAATACAG
CGCGTGATCG TGATAGGCCT TATCGCGCAC ACATGTATCG AGGCAACGGT CAGGTTTGCG
GCTGAGCTAG GATATGATGT GACTGTCATA AACGACGCGG TAGCCGATTA TTCGGATGAG
ATGATGCGCG CCGCCTTAGA GATCAATATG CCGAATTATG CGAACGCCAT CATCTCTACA
GAAGAGGTCC TACAGGCGAT TGCCTCCGCG GGAGCCCTTG CGGTTGCTCC CGAATAA
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| Protein sequence | MTHLTVPFDV TNTGLLVVDP YNDFISEGGK IWSRIQSVAE ANNCVEHMAQ ILQAAREVKM
PVFFAMHHRY REGDYENWKY IAPIQRAAWH RKSFSYGTWG GEFRAEFVPA AGESVAQEHW
CSSGFANTDL DNLLKRRGIQ RVIVIGLIAH TCIEATVRFA AELGYDVTVI NDAVADYSDE
MMRAALEINM PNYANAIIST EEVLQAIASA GALAVAPE
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