| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5460 |
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| Symbol | |
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| ID | 5319762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 426731 |
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| End bp | 427669 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640777222 |
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| Product | ornithine cyclodeaminase/mu-crystallin |
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| Protein accession | YP_001314154 |
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| Protein GI | 150377559 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.798228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.736679 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGTTT TTGACGCCGC CGCCGTTCAC GCGGCGCTTT CCTGGCAGTT TCTGATCGAG
GCACTGCGCA AGGGGCATCT CGGGGAAATG CCTGCCTCCG AGGTCGTGGT GCAATCCGAC
CCAGCCGGCG GCGAAGCCCA ATTCGTCACA CTGCCCGGTT GGGCAAATGG CGGCCCGATC
GTCGTGAAGA TGGTCGGCGT CTTTCCCCAG AACGCGGTGC TCCAGCCGCC ACAACCGGCC
GTTCAGGGGC TCGTGGCGCT ATTCGACGGC AAGACCGGCG GGCCGCTGCT TATCGCCGAT
GGCGCAGCCA TGACGGCGCG CAAGACAGCC GCGGATTCCG CTCTCGGCGC CGCCATCCTC
GCCCGCGAGG ACGTCGAAGA CCTTCTGGTC GTCGGCGCCG GTGCGCTCGC TCCGCATTTC
GCCGAAGCGC ATCTCGCCGC ACGCCCCTCG CTGCGGCGGG TCACGATCTG GAACCGCACC
CCCTCCAGGG CCGAGGCTGT CGCAGCCCAG CTTCGGGAGA AGGGCATCGA CGCCGTGGTC
GGCGACGATC TCGATGACGC CGTCGCCCGC GCCGACGTGG TGTCTTGCGT CACCATGTCG
GACAAGGCGC TGGTCAAGGG CACGCTTCTG CGGCCCGGCG CCCATCTCGA CCTCGTCGGT
GCCTATCTGC CTCATCTTCG AGAAGCGGAC AACGCGGCCC TGACGCGCGG CACGATCTTC
GTCGACAGCC GCAACAACAT GCAGGGCGGC GGCGATCTTT CGCAGGCCGT CGCATCCGGC
GCAATTACCT GGAATGCCGT AGAGGCCGAT CTTTTCGAGC TCGTGCAGGG GAAAAGAGAA
GGCCGCACCG GCGCTGATCA GATCACCGTG TTCAAGAACA ACGGCGGCGC CCATCTCGAC
CTTTTCACCG CCGCTGCGCT TTCGCAGACG CTCGGCTGA
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| Protein sequence | MHVFDAAAVH AALSWQFLIE ALRKGHLGEM PASEVVVQSD PAGGEAQFVT LPGWANGGPI
VVKMVGVFPQ NAVLQPPQPA VQGLVALFDG KTGGPLLIAD GAAMTARKTA ADSALGAAIL
AREDVEDLLV VGAGALAPHF AEAHLAARPS LRRVTIWNRT PSRAEAVAAQ LREKGIDAVV
GDDLDDAVAR ADVVSCVTMS DKALVKGTLL RPGAHLDLVG AYLPHLREAD NAALTRGTIF
VDSRNNMQGG GDLSQAVASG AITWNAVEAD LFELVQGKRE GRTGADQITV FKNNGGAHLD
LFTAAALSQT LG
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