| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5424 |
|---|
| Symbol | |
|---|
| ID | 5319726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009621 |
|---|
| Strand | + |
|---|
| Start bp | 385319 |
|---|
| End bp | 385801 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640777190 |
|---|
| Product | RES domain-containing protein |
|---|
| Protein accession | YP_001314122 |
|---|
| Protein GI | 150377527 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5654] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0585482 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.529196 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGCTC AGATTCTTGA TCGCACGCTG TCCGCATCTC GAATAGGCGA CCCAAAAGGG
ACCTATCCCA TATTCAACGC AACCGGCTCA ACCATAGCCC CTGGGCGGTG GAACACGCCG
GCAAGCCCAA TCATCTACAG CAGCGAGCAC TACTCAACGG CGGTACTCGA AAAACTGGTG
CATGGTAGCG GTCGATTGCC GCCAAACCAG CACTACGTTG AAATCACAAT ACCGCGCGGC
ATAACCTATG AGGTCTTTTC GCCGCCGAGC CTCCTAGGCT GGGACACGAT GCCGGCAACA
GTGAGCAAGG GATTTGGCGA GCAATGGTGC CTCGAAAGGA GGAGCGCAAT CTTGCTGGTC
CCCAGTGTTG TCGCCCGGCT CGACCGCAAT ATTTTGATAA ATCCAGCGCA TCCGGAGTTC
CCTGAAATAC AGGTCAGCCT GCATCAGCCG GTTTACTGGG ATCGGCGCCT CTTCGGACCG
TAA
|
|---|
| Protein sequence | MSAQILDRTL SASRIGDPKG TYPIFNATGS TIAPGRWNTP ASPIIYSSEH YSTAVLEKLV
HGSGRLPPNQ HYVEITIPRG ITYEVFSPPS LLGWDTMPAT VSKGFGEQWC LERRSAILLV
PSVVARLDRN ILINPAHPEF PEIQVSLHQP VYWDRRLFGP
|
|---|
| |