Gene Smed_5420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5420 
Symbol 
ID5319722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp383826 
End bp384140 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content60% 
IMG OID640777186 
Producthypothetical protein 
Protein accessionYP_001314118 
Protein GI150377523 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.286866 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.495843 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCGG ACGACGAAGA ACTGATCAGG AACCGAGCTT ATGAGCTGTG GGAGAGAGCA 
GGGCGACCGC AGGGCGACGG TCTCAAGTAC TGGTTTCAGG CCGCGGAGGA AGTTCAGTCG
ACATTTGATC GCGTCGGGGT GCTGGAGAAT GCTGCAGTTC TTGGCGAAAC CGATGAAGCT
GGAGGCATCG GCGATGCGAA AAGAACGCCG AAACCGAGGG GGAGGGAGCA GCCAGACAGC
GCCGCGCCGC TGAAGAGACG CACGGCTTCC AAATCCAGCG GCGAAAAGAA AGGCAAACCG
ACTGAGGGCC GTTAG
 
Protein sequence
MKPDDEELIR NRAYELWERA GRPQGDGLKY WFQAAEEVQS TFDRVGVLEN AAVLGETDEA 
GGIGDAKRTP KPRGREQPDS AAPLKRRTAS KSSGEKKGKP TEGR