| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5407 |
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| Symbol | |
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| ID | 5319709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 370285 |
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| End bp | 371223 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640777173 |
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| Product | phage integrase family protein |
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| Protein accession | YP_001314105 |
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| Protein GI | 150377510 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.114789 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTCC TTGCCGAACA GGACCGCTAC CTGAGCATCA GAAGACGGCT GGGCGCCGAT
CTGAGTACGG ACGAACGCAT TTTGCGTCGC TTCGCCGCCT TTGTCGACAA CGATGGCGCG
GAGTACATCG ACACCAGATT GATCATGCGT TGGCTGGAGA GCCTCCCCTC CGCCAGTGCC
GGAACACGGG GCGCTCGCTT CCGGGTGGCT CGTCAATTTG CCGCCTGGCT GCACGGGACG
GATCCGCGGC ACGAGGTGCC GCCCCAAGGG TTGGTGCCTG GTCATGTTCA ACGGGTACAT
CCACACATTT ACAGCGACGC CGAAATCATT GCGATTATCG AGCATGCCCG ATCGTTGCCA
TCGGTTTACG GCATGCGCGG CTTGACCTGC TCGACGCTCT TCGGCCTGAT CGCCGTGACG
GGACTTCGGA TCAATGAAGC CCTGCGTCTC GACCAGACCG ATCTTGATAT TGAAACCGGC
GTCCTTCGTG TTCGCTTCGG AAAACTCGGC AAGGAACGAC TATTGCCGCT GGATCCAACT
GTAGCGCAAA AACTGGAAAG CTATGGGCGT GAGCGGGACC GGCTATTGGG GCGCAGATCG
GAGGCCCTAT TTGTCGCGTG TAAGGGCCAT CGTCTCGGCG ATTGCGGCGC ACGCTACAAC
TTCGCGCTGG TCTGCCAGCA GATCGGTTTG AGGCCCAGGC AGGATTACAA GCGCCATGGA
CGCGGGCCGC GCATCCACGA CCTTCGCCAC ACCTTCGCGG TTCGGACGAT GCTAAACTGG
TATCGATCCG GCCACGATGT GGGCCGCGAG ATGATCAAAC TCACGACCTG GCTCGGTCAC
GCGAGCCCGA CCGATACCTA TTGGTACCTG GAAGCGGTCC CGGAATTGCT GGAATTAGCT
GCCGCTCGGA TAACGAGCGC GGCGGAGGGG GAGCAATGA
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| Protein sequence | MSLLAEQDRY LSIRRRLGAD LSTDERILRR FAAFVDNDGA EYIDTRLIMR WLESLPSASA
GTRGARFRVA RQFAAWLHGT DPRHEVPPQG LVPGHVQRVH PHIYSDAEII AIIEHARSLP
SVYGMRGLTC STLFGLIAVT GLRINEALRL DQTDLDIETG VLRVRFGKLG KERLLPLDPT
VAQKLESYGR ERDRLLGRRS EALFVACKGH RLGDCGARYN FALVCQQIGL RPRQDYKRHG
RGPRIHDLRH TFAVRTMLNW YRSGHDVGRE MIKLTTWLGH ASPTDTYWYL EAVPELLELA
AARITSAAEG EQ
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