| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5406 |
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| Symbol | |
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| ID | 5319708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 369069 |
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| End bp | 370214 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640777172 |
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| Product | phage integrase family protein |
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| Protein accession | YP_001314104 |
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| Protein GI | 150377509 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.197458 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAATAT TCGACAAAGC CACCTGCCTT GACCCGTACT TAGCGTCATT CGAGCAAAGT
TTTTCCGCGA GGAATTATAA GCCCGCGACG CTGGAGAATT ATCGCTATCA CCTCCGGTGC
TTTGGCCGAT TGCTGGATGT GGAAGGCATC GCGCCTTCGG CACTGACGGC AGATATTGCC
GTCGAATTAG GACGGCGATT GCCAACGACA CCCAAAGCCC AGATCAAGGT TGCCAATCTT
GCCGGGCTGT TCGTCGAGCA TCTGATTGAA ATAGGCGTGG CGACACGCCC GTCGCTCACT
GCTGCTCAAG CCGAACGCCA AGAGCTCCTG GGCGACCTCG AAACCTACCT CGAGCGGCAA
CGCGGCCTCA GCCCACGGTC CGTCAAACAT GTGCTGGGAT TCGCGGCTCG CTTCCTCGCT
CACCGCTTCG GGGACCAGAT GCTCGATCTC GCGATCTTGA ACGCTCGCGA TGTCGTGGCG
TTCATGGAGC ATGTTATCGG ACGCAAGACG CCCTACCGAG ACAAGACGTT ATCCTCGCAC
TTGCGCAGCT TCTTCCAGTA TCTGTTCGCT CAGGGGCTCA TCACCACGAA CCTCTCACTC
TGCGTACCTA GGGTACACAA GCCCTGGGGG GCGAGGCTTC CGCGATATCT GTCGCCCGAT
GAAGTGGAGG CTGTGCTGGC ATCTGTCGCA ACCAATCCGC GGCGAGGCGC CCGCGACTAC
GCCATGTTGC TGTTGATGGC GAGGCTCGGC ATGCGCGCGC CCGAGGTCAT GGCGGTCCAA
CTCGATGACA TCGACTGGCG GGCCGGCGAG CTTCTGGTTC GCGGAAAGGG AAAACGTCAT
GACCGGCTGC CAATCCCGTC GGACGTCGGC GAAGCCATCA GCAGGTATTT GCGCGAGGAG
CGGACTTCAA CGACAATCCG CACGCTGTTA GTGAGCCATC GGGCGCCGAA CCGTCCGTTC
AAGGATAGCC AAATCATCAA CTCGATTTTG CGGGAAGCGT TCGCGGCGAC CGGAGTGAAG
CCGCCGACAC CCTATGTCGG ATCGCATGTT CTGCGTCACA GCCTTGCGAC AAATCTGGTT
CGGTCCGGTG CTTCGCTGGA GGAGATCGGG GTCTGCTGCG GCATCGATCG CGTGCAACAA
CGATGA
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| Protein sequence | MRIFDKATCL DPYLASFEQS FSARNYKPAT LENYRYHLRC FGRLLDVEGI APSALTADIA
VELGRRLPTT PKAQIKVANL AGLFVEHLIE IGVATRPSLT AAQAERQELL GDLETYLERQ
RGLSPRSVKH VLGFAARFLA HRFGDQMLDL AILNARDVVA FMEHVIGRKT PYRDKTLSSH
LRSFFQYLFA QGLITTNLSL CVPRVHKPWG ARLPRYLSPD EVEAVLASVA TNPRRGARDY
AMLLLMARLG MRAPEVMAVQ LDDIDWRAGE LLVRGKGKRH DRLPIPSDVG EAISRYLREE
RTSTTIRTLL VSHRAPNRPF KDSQIINSIL REAFAATGVK PPTPYVGSHV LRHSLATNLV
RSGASLEEIG VCCGIDRVQQ R
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