| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5395 |
|---|
| Symbol | |
|---|
| ID | 5319697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009621 |
|---|
| Strand | + |
|---|
| Start bp | 360143 |
|---|
| End bp | 360358 |
|---|
| Gene Length | 216 bp |
|---|
| Protein Length | 71 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640777164 |
|---|
| Product | conjugal transfer protein TraD |
|---|
| Protein accession | YP_001314096 |
|---|
| Protein GI | 150377501 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.488744 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.457429 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAGAG CGATGACATC TGATGCCCGC AAGAAGGACA CGCGGGAGAA GATCGAGTTA
GGCGGCCTGA TCGTCAAGGC GGGTTTGCGA TATGAGAAAC GCGCGCTCTT GCTCGGGGCG
TTGGTCGAAC TCAGCCGCCG GCTGAAGTCC GACGAAGGTG AGCGGGCGCG GTTAATCGCG
ATCGGCGCGG AAGCTTTTGG CAATGATAGC GAATAG
|
|---|
| Protein sequence | MARAMTSDAR KKDTREKIEL GGLIVKAGLR YEKRALLLGA LVELSRRLKS DEGERARLIA
IGAEAFGNDS E
|
|---|
| |