| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5378 |
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| Symbol | |
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| ID | 5319680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 343901 |
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| End bp | 344197 |
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| Gene Length | 297 bp |
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| Protein Length | 98 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640777148 |
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| Product | conjugal transfer protein TrbD |
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| Protein accession | YP_001314080 |
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| Protein GI | 150377485 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5268] Type IV secretory pathway, TrbD component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.832169 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.316362 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAATT CCCTCGGTCT GCAACGCAAC CGCGTTCATC GCGCGCTTTC GCGCCCGAAC
CTCCTGATGG GCGCGGACCG GGAGCTGGTT TTGATCACCG GGCTTGCGGC CGTGATCCTG
ATCTTCGTCG TGCTTACGAT TTATTCGGCG CTCTTCGGTG TCGCAGTCTG GATCGTGATC
GTGGGCTTTC TCAGGATGAT GGCGAAGTCC GATCCACTGA TGCGACAGGT CTATTTACGG
CACATTTCCT ACAAACCCTA CTATGGGGCG ACTAGTTCGC CGTGGCGCCG ATCCTGA
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| Protein sequence | MSNSLGLQRN RVHRALSRPN LLMGADRELV LITGLAAVIL IFVVLTIYSA LFGVAVWIVI
VGFLRMMAKS DPLMRQVYLR HISYKPYYGA TSSPWRRS
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