Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5363 |
Symbol | |
ID | 5319665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | + |
Start bp | 330105 |
End bp | 330878 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640777135 |
Product | hypothetical protein |
Protein accession | YP_001314067 |
Protein GI | 150377472 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.185372 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGGAAT TTCTGCTGTT TGCGCTGGTC GGCTTTCTCG CCCAGGCGAT CGATGGCGCT CTGGGCATGG CATATGGTGT CATCTCTTCG ACGGTGCTTC TCGCCTTGGG CGTGCCGCCC GCTCAGGCAT CGGCATCGGC CCATGCGGCG GAACTGTTCA CCACCGCCGC TTCCGGGTCG GCCCATCTTT ACCACCGGAA TATCGATTGG AAGCTGTTCT GGCGGCTCGT CCCTTTTGGC GTCGTCGGCG GAATGCTGGG TGCTTTCGTG GTGACCTCGT TCGATGGAGA TCAGGTCAAG CCTTTCGTCA CAGCCTATCT CGCAGTGATT GGGGCCTGGC TGCTTTATCG CTCCTTCCAC CGCATTCCCA CAAAACCGGT CAAGCTGAGA ATCGTTGCGC CGCTCGGTGC AGTCGCGGGA TTTCTGGATG CCGCCGGCGG CGGCGGCTGG GGGCCGGTCG CCACCACCGG TCTGCTCGGC GCCGGCGGGC AGCCGCGATT TGTCATCGGT ACCGTCAGCG CAAGCGAGTT TCTGATCGCC CTGTCTGTAT CACTAAGCTT CCTGGCCACA ATCTTGACCG GTCATTGGGA GCAGGCCGGC GAGTTCCGCG ACTATCTTGC TTCCATTGGC GGGCTCATCA TCGGCGGCGT GATGGCGGCT CCTCTTGCAG GATGGGCCGT CAAGGCGCTG CGGGAGAAAA CGCTCCTGCG TCTCGTCGGA TCCATGATCG TGCTTTTGGC CGGCTATCAG ACGCTGGAGC TCACCGGGTT CTAG
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Protein sequence | MEEFLLFALV GFLAQAIDGA LGMAYGVISS TVLLALGVPP AQASASAHAA ELFTTAASGS AHLYHRNIDW KLFWRLVPFG VVGGMLGAFV VTSFDGDQVK PFVTAYLAVI GAWLLYRSFH RIPTKPVKLR IVAPLGAVAG FLDAAGGGGW GPVATTGLLG AGGQPRFVIG TVSASEFLIA LSVSLSFLAT ILTGHWEQAG EFRDYLASIG GLIIGGVMAA PLAGWAVKAL REKTLLRLVG SMIVLLAGYQ TLELTGF
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