Gene Smed_5363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5363 
Symbol 
ID5319665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp330105 
End bp330878 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content62% 
IMG OID640777135 
Producthypothetical protein 
Protein accessionYP_001314067 
Protein GI150377472 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.185372 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGAAT TTCTGCTGTT TGCGCTGGTC GGCTTTCTCG CCCAGGCGAT CGATGGCGCT 
CTGGGCATGG CATATGGTGT CATCTCTTCG ACGGTGCTTC TCGCCTTGGG CGTGCCGCCC
GCTCAGGCAT CGGCATCGGC CCATGCGGCG GAACTGTTCA CCACCGCCGC TTCCGGGTCG
GCCCATCTTT ACCACCGGAA TATCGATTGG AAGCTGTTCT GGCGGCTCGT CCCTTTTGGC
GTCGTCGGCG GAATGCTGGG TGCTTTCGTG GTGACCTCGT TCGATGGAGA TCAGGTCAAG
CCTTTCGTCA CAGCCTATCT CGCAGTGATT GGGGCCTGGC TGCTTTATCG CTCCTTCCAC
CGCATTCCCA CAAAACCGGT CAAGCTGAGA ATCGTTGCGC CGCTCGGTGC AGTCGCGGGA
TTTCTGGATG CCGCCGGCGG CGGCGGCTGG GGGCCGGTCG CCACCACCGG TCTGCTCGGC
GCCGGCGGGC AGCCGCGATT TGTCATCGGT ACCGTCAGCG CAAGCGAGTT TCTGATCGCC
CTGTCTGTAT CACTAAGCTT CCTGGCCACA ATCTTGACCG GTCATTGGGA GCAGGCCGGC
GAGTTCCGCG ACTATCTTGC TTCCATTGGC GGGCTCATCA TCGGCGGCGT GATGGCGGCT
CCTCTTGCAG GATGGGCCGT CAAGGCGCTG CGGGAGAAAA CGCTCCTGCG TCTCGTCGGA
TCCATGATCG TGCTTTTGGC CGGCTATCAG ACGCTGGAGC TCACCGGGTT CTAG
 
Protein sequence
MEEFLLFALV GFLAQAIDGA LGMAYGVISS TVLLALGVPP AQASASAHAA ELFTTAASGS 
AHLYHRNIDW KLFWRLVPFG VVGGMLGAFV VTSFDGDQVK PFVTAYLAVI GAWLLYRSFH
RIPTKPVKLR IVAPLGAVAG FLDAAGGGGW GPVATTGLLG AGGQPRFVIG TVSASEFLIA
LSVSLSFLAT ILTGHWEQAG EFRDYLASIG GLIIGGVMAA PLAGWAVKAL REKTLLRLVG
SMIVLLAGYQ TLELTGF