| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5360 |
|---|
| Symbol | |
|---|
| ID | 5319662 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009621 |
|---|
| Strand | + |
|---|
| Start bp | 325916 |
|---|
| End bp | 326485 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640777132 |
|---|
| Product | potassium-transporting ATPase subunit C |
|---|
| Protein accession | YP_001314064 |
|---|
| Protein GI | 150377469 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2156] K+-transporting ATPase, c chain |
|---|
| TIGRFAM ID | [TIGR00681] K+-transporting ATPase, C subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.985584 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.054926 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAATC AACTTCGCCC CGCACTCGTC CTCACCCTCG CCTTCACGGC GATCACCGGG
TTTGCCTATC CGCTGGCGAT CACTGGTGTG GCTCAGGTGC TTATGCCGGC AGAGGCGAAT
GGCAGCCTCG TTCGCAAGAA CGGAGTCGTC ATCGGTTCCG GCCTGATCGG CCAGAACTTC
GCCTCGCAGA GATATTTCTG GCCCCGCCCT TCGGCAACTG TGCCGGGGCC CTACAATGCC
GGTTCGTCGA GCGGCTCCAA TCTGGGCACG ACATCCATCA GGCTGAAGGA TCGCGTCGCG
GTCGACATCG AGCGCCTGCG GGAAGCGGGC GTGTCGGGCG TCGTGCCCGC GGATGCCGGT
ACCGCGTCGG CGTCGGGACT CGACCCGCAC ATCTCGCCCG CCTTCGCACG GGCCCAAGTT
GCCCGGATCG CAAGGGCGAG GAGGCTCCGC GAGGCGGATG TCGCCGCCCT CGTTAAGAGA
AATGCCCAAG GGCGTCTCAT GGGCATCATA GGCGAGCCGC GCGTCAATGT GCTAGAACTC
AACCTGGCCC TGGATGCTTC AGGGAACTGA
|
|---|
| Protein sequence | MLNQLRPALV LTLAFTAITG FAYPLAITGV AQVLMPAEAN GSLVRKNGVV IGSGLIGQNF
ASQRYFWPRP SATVPGPYNA GSSSGSNLGT TSIRLKDRVA VDIERLREAG VSGVVPADAG
TASASGLDPH ISPAFARAQV ARIARARRLR EADVAALVKR NAQGRLMGII GEPRVNVLEL
NLALDASGN
|
|---|
| |