Gene Smed_5347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5347 
Symbol 
ID5319649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp308632 
End bp309447 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content65% 
IMG OID640777120 
ProductN-formylglutamate amidohydrolase 
Protein accessionYP_001314052 
Protein GI150377457 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3931] Predicted N-formylglutamate amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.730049 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAGGC TCGCAGATCG CGAAACGACC ACATTGCTTC AGGCGGGCGA CCCCGATCCC 
GTAGAGCGGG TCAATTCCAC CGGCCGGTCG GAGATCTTCC TCACTTGCGA ACATGCGGGG
CGGGCGGTGC CTGCCGCGCT TGGCGATCTC GGGATCGCGT CCGAGGAAAT GGACCGCCAC
ATCGCCTACG ACGTCGGCGC GGAGGGTATT GCACGCGGCA TTTCCGAGCG GCTCGATGCG
GCGCTTGTCC TGCAGCGCTA CAGCCGCCTC GTCATTGACT GCAACCGGCC CTTGGCAGCG
GCGGACTGCA TCGTCGAACG GAGCGACGGC ACCGCTGTTC CGGTCAATGC CGAACTCTCC
GATCGTGAAC GCCGCAATCG CTTCGTAGAG ATCCATCAGC CGCTACACGA GGCGATTGCC
GGCGCGCTCG ATCCGCGGCA GGCGAGCGGC AAGCCGCTCT TCCTCGTCTC GGTACACAGC
TTTACGCCGG TCATGCGCGC GACCGGAGCC GTGCGGAACT TCGAACTCGG CCTTCTCTTC
AATCGCGATG CCCGCTTCGC CGAACGGCTT GCAACAGCCT TCCGTGCCGC CAATCCGGAC
GTCACCGTCA GGCTCAACGA GCCCTATCAC GTGGACGATT TCTCCGATTA CACGATCCCC
GTACACGGCG AGCGGCGCGG CATCCCGCAT GTGCTTCTCG AAGTGCGCAA CGACCTCATC
ACCGACACCC GCGGGCAACA GGAATGGGCG GACCGGCTGG CCGGTCCCCT CCGCCTTGCA
GCAGAAAGCC TCAAAGGAAC CCATGATGGC CGCTGA
 
Protein sequence
MLRLADRETT TLLQAGDPDP VERVNSTGRS EIFLTCEHAG RAVPAALGDL GIASEEMDRH 
IAYDVGAEGI ARGISERLDA ALVLQRYSRL VIDCNRPLAA ADCIVERSDG TAVPVNAELS
DRERRNRFVE IHQPLHEAIA GALDPRQASG KPLFLVSVHS FTPVMRATGA VRNFELGLLF
NRDARFAERL ATAFRAANPD VTVRLNEPYH VDDFSDYTIP VHGERRGIPH VLLEVRNDLI
TDTRGQQEWA DRLAGPLRLA AESLKGTHDG R