| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5338 |
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| Symbol | |
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| ID | 5319640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 300197 |
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| End bp | 301180 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640777111 |
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| Product | basic membrane lipoprotein |
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| Protein accession | YP_001314043 |
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| Protein GI | 150377448 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.440204 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAGAA ATCTGATGAT GAGCCGGCGC AATGTGCTTG CGTCCGGCTT GGCGCTTGGC
GTGAGCGCTT TCGCGCCGGC CGTCCGCGCC GCGCCGATAA AGGTCGCGGG CATCCACGCC
TCTCCGGTCG AGAATGCCTG GAACTCGGTC TTGCACAAGG CACTGCAGGA CGCGGCTGCC
GAAGGCGCGA TCGAATATGT GTTCTCCGAA GGCGTTTCCG GTACGGATTA CCCCCGCGCG
ATGCGCGAAT ATGCCGAGCA GGGCGTAAGA CTCATCATCG GCGAAGCTTA TGCTGTTGAA
AAGCAGGCCC GCGACGTCGC CGCCGACTAT CCGGAGACTG CCTTCGTACT CGGCTCGAGC
GGCAAGGAAG CCGGCGAGAA CTTCGGTGTC TTCGGCACAT GGAACCATGA CGGCGCCTAT
CTTGCCGGCA TGCTCGCAGG GAAGATGACG AAGTCGAACG TCGTCGGCTC CGTCGGCGCC
ATTCCGATAC CGGAAGTCAA CATGCTCATC AATGCTTTCG CCGCCGGCGT AAAGGCCGTC
AATCCGGAAG CCAAGCACCT CGTCGCCTTC ATCGGCACCT TTTTCGATCC GCCAAAGGCG
CGTGAAGCGG GCCTCGCCCA GATCGATGCC GGCGCCGACA TCCTTTTCGG CGAACGTATC
GGCACCGCCG ACGCGGCGAA GGAACGTGGA CTCAAGTCCG TGGGTTCTCT GATCGACTAC
ACGCCGCGCT ACCCCGAGAC GGTCTTCGCC AACGCACTCT GGGGCTTCCG CCCGATCCTC
GACGCGGCAA TAGCCGACGT TTCCGCCGGC AACCCGGTCG GCAAGGATTA CACCGCCTTC
GGCCTGCTGA AGGAAGGCGG CAGCGACATT GCCTATGTAA AGGGCGTCGC ACCGGCGGAT
GCCGAAGCGG CCATGGAAGC CAAGCGCGCC GAGATCAAAT CGGGCGCCTT CGAGGTTCCG
CGCATAACCG ACGAGCCGAA GTAA
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| Protein sequence | MTRNLMMSRR NVLASGLALG VSAFAPAVRA APIKVAGIHA SPVENAWNSV LHKALQDAAA
EGAIEYVFSE GVSGTDYPRA MREYAEQGVR LIIGEAYAVE KQARDVAADY PETAFVLGSS
GKEAGENFGV FGTWNHDGAY LAGMLAGKMT KSNVVGSVGA IPIPEVNMLI NAFAAGVKAV
NPEAKHLVAF IGTFFDPPKA REAGLAQIDA GADILFGERI GTADAAKERG LKSVGSLIDY
TPRYPETVFA NALWGFRPIL DAAIADVSAG NPVGKDYTAF GLLKEGGSDI AYVKGVAPAD
AEAAMEAKRA EIKSGAFEVP RITDEPK
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