| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5333 |
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| Symbol | |
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| ID | 5319635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 293945 |
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| End bp | 295243 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640777106 |
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| Product | cytosine deaminase |
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| Protein accession | YP_001314038 |
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| Protein GI | 150377443 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGATC TGATCATCCG CAATGCAAAC CTTCCCGACG GGCGCGAGGG CCTGGACATA
GGCGTTTCCA GCGGCAAGAT CGCCGCCATC GGGAAATCCA TCGTCGTGGC CGCCGGCGAG
GAGATCGACG CGGCCGGCCG GCTGGTGAGC CCGCCCTTCT GCGATCCGCA TTTCCACATG
GATGCGACCC TGTCGCTCGG TTTGCCGCGC ATGAATGTTT CCGGGACGCT GCTCGAGGGC
ATCGCGCTCT GGGGCGAGTT GCGCCCGCTC CTCACGAAGG AAGCCCTGGT CGAGCGGGCC
CTGCGCTATT GCGACCTCGC CGTCACACAA GGCCTCCTTT ATATTCGCAG CCATGTGGAC
ACGTCCGATC CGCGCCTGGT GACGGCCGAG GCGCTGCTCG AGGTGAAGGA AAAGGTCGCC
CCCTATATCG AGTTGCAACT CGTCGCCTTC CCCCAGGATG GCTACTACCG TGCGCCGGAC
GGCGTCTCCT CGCTCGATCG CGCTCTCGAC ATGGGCATCG GCATCGTCGG GGGCATTCCG
CATTTCGAGC GGACGATGGA GGACGGCGCG CGCTCGGTCG AGGCGCTGTG CCGGATCGCC
GCCGACCGCG GCCTGCCGGT CGACATGCAT TGTGACGAGA CCGACGATCC CATGTCGCGC
CACATCGAGA CGCTGGCGGC GCAGACCGTG CGCTTCGGCC TCCAGGGGCG CGTGGCAGGT
TCGCATCTCA CCTCGATGCA TTCGATGGAC AACTATTACG TCTCGAAGCT CATTCCGTTG
ATGGCCGAGG CGGAAATCAA CGTGATCCCC AATCCGCTGA TCAACATCAT GCTGCAGGGG
CGCCACGACA GCTATCCGAA ACGGCGCGGC ATGACGCGGG TGCGGGAGCT GATGGCGGCG
GGCCTCAACG TCTCCTTCGG CCATGACTGC GTCATGGACC CCTGGTACTC GATGGGCTCT
GGCGACATGC TGGAGGTCGG TCACATGGCC ATCCATGTCG CGCAGATGGC CGGCATCGAC
GACAAGCGCA GGATATTCGA CGCGATCACC GTCAATTCGG CAAAGACCAT GGGGCTTGAA
GGCTACGGCC TGGACGTCGG GTGCAAGGCA GATCTGATCG TGCTGCAGGC CGCTGATGTC
ACCGAGGCGT TGCGGCTGAA GCCGAACCGG CTGTTCGTCA TCAAAGCGGG CAAGGTCGTC
GCCAGGACCG CGCCGCGCGT CGGCGAGCTC TTCCTCGCCG GGCGGCCTGC CTCGATCGAC
ACGGGACGCG ACTACGTTCC CCCGGTGCTG CAGCGCTGA
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| Protein sequence | MFDLIIRNAN LPDGREGLDI GVSSGKIAAI GKSIVVAAGE EIDAAGRLVS PPFCDPHFHM
DATLSLGLPR MNVSGTLLEG IALWGELRPL LTKEALVERA LRYCDLAVTQ GLLYIRSHVD
TSDPRLVTAE ALLEVKEKVA PYIELQLVAF PQDGYYRAPD GVSSLDRALD MGIGIVGGIP
HFERTMEDGA RSVEALCRIA ADRGLPVDMH CDETDDPMSR HIETLAAQTV RFGLQGRVAG
SHLTSMHSMD NYYVSKLIPL MAEAEINVIP NPLINIMLQG RHDSYPKRRG MTRVRELMAA
GLNVSFGHDC VMDPWYSMGS GDMLEVGHMA IHVAQMAGID DKRRIFDAIT VNSAKTMGLE
GYGLDVGCKA DLIVLQAADV TEALRLKPNR LFVIKAGKVV ARTAPRVGEL FLAGRPASID
TGRDYVPPVL QR
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