| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5323 |
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| Symbol | |
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| ID | 5319625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 281345 |
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| End bp | 282613 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640777097 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001314029 |
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| Protein GI | 150377434 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.666672 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.745062 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCTTC AGGAAAGCGC AATTTACGCC GGCCCCCCGA TTGCGTCTCC GGAGGTGCGG
TCTCAGCCGC TCAGACCGGC TGTCATGGCC GAGGTCGAGC GCCTTCTCGG GGGGCGGACG
CGCGACATCC GGCTTAAAGG TGAGCTTGGC CGTCTGTTCG AGGAGCGGTC GTGGTCGCGA
ACCGCCAAGA TCATCCGCGC CTGGATGATC TGGGTGACCT TGCTGGACGT ATTGACGCTG
GGCCTCAATG CGATCCTGCT TCCAAATGCG GTCGCACTGT CGATGCTTCC GCCAGCCTGC
ATACTTCCGC CTGCAGCGTT GGCCACTGCG TTCATCTGGC GAAAGCCAAG GGGCGTCGGG
CTTCAGAGGG TGTCCCTGGT CGCAGGCCTT TTCCTCATTC TCCTGTCCGT CGCGCTGGTG
GGCGTGAGCG CGGGTGGCGA GTTTTACGAG CGGCACTTGA ACATCATGCT GTTCGTCGCC
ATTACCGCAA TTATCATTTT TTCCATTCCT CTGGCGTGGA CGGTGGCGGT CGCCTCTTTC
GCTTTGGCTC TCTACCTGAT TTTCCAGCTG CGCAATCCGA TGCTGGATAC GGGCAGCGCC
GTAGCGGGGA CGCTGTTTTT CACGAGTGGC ATCGTCGCGA CTGTGGTTGC CCGCCGCACG
ATGACGATCC TCGCCCAGAA GACCTTTCTT CTCGAACTTC GAGACAAACG GCGCGTAGCG
GAGCTTGCCG ATGCGAATGC CCGCCTCGAG CGGCTTGCGA AAACCGACCC TCTGACCGGG
ATCGCCAACA GGCGCTGGAT GATGGAAACA CTCAATCGCC TCTGGGGCGC AGGCGCCGAG
CGTCCCGCCG GCACTGCCAT GCTGATGTGC GACATCGACG ACTTCAAGAG CCTCAACGAT
CGGCTTGGCC ATGCCGAAGG CGATCGTTGC CTCGTGAAGG TTGCCGGCAT CATTCAGAGC
AGCGTCAGGC GGAATCGCGA CCATGTGGCC CGCTACGGCG GCGAAGAATT TCTCGTCGTG
CTCCCGGGAG CGGATGTGCA AGCGGCCCTG GCCACGGCTG AGCGCATCAG GGCGAGCGTC
GAAGCCGCCT CACTTCCGAA CCCCGCATCC CGCGTAGCGC CTTACGTCAC CCTCAGCATC
GGTGTGGCGG CGCAGGGCGC AGCCGGCGAG ATTATCGGGC CGGAAAGGCT TCAGAACCAG
GCTGACACGG CACTCTACCT GGCGAAGAAA GCGGGCCGAA ATCGTGTCGT CCTCTTTCGG
CCCGAATGA
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| Protein sequence | MELQESAIYA GPPIASPEVR SQPLRPAVMA EVERLLGGRT RDIRLKGELG RLFEERSWSR
TAKIIRAWMI WVTLLDVLTL GLNAILLPNA VALSMLPPAC ILPPAALATA FIWRKPRGVG
LQRVSLVAGL FLILLSVALV GVSAGGEFYE RHLNIMLFVA ITAIIIFSIP LAWTVAVASF
ALALYLIFQL RNPMLDTGSA VAGTLFFTSG IVATVVARRT MTILAQKTFL LELRDKRRVA
ELADANARLE RLAKTDPLTG IANRRWMMET LNRLWGAGAE RPAGTAMLMC DIDDFKSLND
RLGHAEGDRC LVKVAGIIQS SVRRNRDHVA RYGGEEFLVV LPGADVQAAL ATAERIRASV
EAASLPNPAS RVAPYVTLSI GVAAQGAAGE IIGPERLQNQ ADTALYLAKK AGRNRVVLFR
PE
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