| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5317 |
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| Symbol | |
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| ID | 5319619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 274503 |
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| End bp | 275444 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640777091 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001314023 |
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| Protein GI | 150377428 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.566323 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGATGC TTGGGCGGAT TTCGCGAAAG CCATGGATGT GGTCTTGGAC CGCAGCCTTC
GTCGTCTGGT TCGCCACCAT CATGGTGACC GGCGGCGCAA GCACATTTGA TCTTTCCCAG
GCGGCGCTCA CCTTCGCTGC CTTCTCCATC ATCGTCGGCA TCGGCCAGAT GTTCGTCATT
ACGCTGGGTC CGGGCAATAT CGACCTTTCG GTTCCCTCCA CCATGACGCT CGCGGGAACG
CTGGCACTCA AACTCATGGA GGTGGACAAT GCGATGATCG TGCCCGGCCT CGTCATTGCG
ATGATCACCG GCGTCGGTGT GGGTGTAGTG AACTATGCTC TGATCAAGGC GCTGCGCATC
CCGCCTATCA TCGCGACGCT GTCCGTGAGC TTCATCGTCC AATCTGCGGC TATCTGGACC
AATCGTGGCT TGCGCATCAA ACCGCCGAGC TTCCTTGCGG ATTTCACGAC GGCAAATACG
CTCGGGGTTC CAAACGTCGC GATCATCGCG CTCGTCATCT CAGTCTTTGC CTGGTTCCTG
CTCGAAAAGA CGATCTACGG GCGGTGGATC TCCGCGGTCG GGCAGAGCAT GCCCGCGGCG
AAGATGGCAG GCATTCCCGT GGACGGTACC CGCTTCGTCA CCTATATCTT CTGCGCCGTA
CTCGCCTCTC TCGCCGGCTA TCTGCTCGCC TGCTTCTCCG GCGGTGCGGC GCTCAACATG
GGGTCGGAAT ATCTGCTGAT GTCGATCGCG GTTGTCGTAC TCGGCGGCAC GGCGGTCGCC
GGCGGCGATT CGAACGTGCC GGGCATATGG GGCGCCTCGC TTTTCATGTT CCTGGTCGTC
TCCATGCTCA ACACCTACGG GCTCGGAGCC GGCATCCGCC TGATCATGAC CGGGCTCATC
ATCATCAGCG TCATCATGCT CGCAGGCGGC CGCGCGCGCT GA
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| Protein sequence | MRMLGRISRK PWMWSWTAAF VVWFATIMVT GGASTFDLSQ AALTFAAFSI IVGIGQMFVI
TLGPGNIDLS VPSTMTLAGT LALKLMEVDN AMIVPGLVIA MITGVGVGVV NYALIKALRI
PPIIATLSVS FIVQSAAIWT NRGLRIKPPS FLADFTTANT LGVPNVAIIA LVISVFAWFL
LEKTIYGRWI SAVGQSMPAA KMAGIPVDGT RFVTYIFCAV LASLAGYLLA CFSGGAALNM
GSEYLLMSIA VVVLGGTAVA GGDSNVPGIW GASLFMFLVV SMLNTYGLGA GIRLIMTGLI
IISVIMLAGG RAR
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