| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5309 |
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| Symbol | |
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| ID | 5319611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 264695 |
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| End bp | 265585 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640777084 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001314016 |
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| Protein GI | 150377421 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.446177 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGTTGT CGGAAAGTAA GATTGTCGAG CGGGCGATCT ACAGGCCCAG TCCGAGCAGC
ATAGAGGGAA CGCCGACACG TCTGCACTTC TTCCACGCCC ATCCGGCGAT CATGCTGGGC
CCACATTGGC ATGCACAAGT CGAAGTCAAC TACGTGATGC GCGGCTCTAT GCATTACCGT
ATGGCCGACC ATGATTTCCG GCTTCACGCA GGACAGATGT GCCTCTTCTG GGGCGGCCAG
CCGCACAGGA TGGACGAGTC CTCAGACGAT TCCATTTATG CAGGCGGCCA TCTGCCGCTC
GTCCACTTCT TCCGCATGCG GCTGCCCCCG GCAATCTCGG CAATGCTCAT GGGCGGAGCT
ACGATGCTGA CGTCCGAGAC GGACGCTGCC GACGACCAGA ATTTTCCGCG CTGGCGGAAT
TGGGCTCACT CCGGAGACGA GGTGAAAGCT CAACATGCTG TTGAAGAACT GCTGCTGCGC
CTCGAACGAA TGTTCATGGA GCCCTACACG ATCGTGTCGT CCGGTAAGGA ATTGAGAACC
GGGAGCGCCT CGGCTTCGCC CTCGCCCGGC GTCGTGCGCA TGTGCGATTT CATTGCCGCC
AATTTCCTCG ACGAGATCGA CGCGGGCGAC ATAGCCGCCG CAGCCGGCTT GCATCCGAAA
TACGCGATGA ACCTTTTCCG CAAGTCGACG GGCATGACGC TGATCGCATA CCTGACCCTG
CTGCGCCTCT CGCGGGCGCA AGCCATGCTG ATGAATGGCA AGGAGAGCAT TCTACAGGTT
GCCATGGATA GCGGCTTCGG ATCGGTGAGC GCCTTCAACA AGGCTTTCCG GCAGATTGCC
GGCATGCCGC CGTCGGACTT CCGCCGAGAC ATTCGCGCCA CGGCGCGGTG A
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| Protein sequence | MKLSESKIVE RAIYRPSPSS IEGTPTRLHF FHAHPAIMLG PHWHAQVEVN YVMRGSMHYR
MADHDFRLHA GQMCLFWGGQ PHRMDESSDD SIYAGGHLPL VHFFRMRLPP AISAMLMGGA
TMLTSETDAA DDQNFPRWRN WAHSGDEVKA QHAVEELLLR LERMFMEPYT IVSSGKELRT
GSASASPSPG VVRMCDFIAA NFLDEIDAGD IAAAAGLHPK YAMNLFRKST GMTLIAYLTL
LRLSRAQAML MNGKESILQV AMDSGFGSVS AFNKAFRQIA GMPPSDFRRD IRATAR
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