Gene Smed_5295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5295 
Symbol 
ID5319597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp258094 
End bp258573 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content60% 
IMG OID640777070 
Productactivator of Hsp90 ATPase 1 family protein 
Protein accessionYP_001314002 
Protein GI150377407 
COG category[S] Function unknown 
COG ID[COG3832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.703739 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.533696 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAAG CGCAGCTTTT CCACGGCACG TTCACACTGA AGCGCATTTG GGCGGCCCCG 
CCCCACCGGG TGTTCGACGC ATGGTCCGAT CCGCAGCTCA AGGCCCAGTG GTTCACCGGA
CCGCCAGAGC GGTGGACATT GCTTCGCCGG TCGATGGACT TCCGCGTGGG CGGGCAAGAG
GTCTTGGAAG GGCGCTTCCA CGAAAGCGGC ACGGTGACGC TTTTCGAGGC CCGCTACCAT
GCGATCGAAC CGGCCCGGCG GCTCGTCTAT ACCTACGACC TGCATCACTC CGGACGCTTC
CATTCGGTCA CCTTGTCGAG TCTGCAACTC GAATCGGAAG CGGGCGGAAC CCGCGTCTCC
TATACCGAGC AAATCGTTTT CCTGAACGGG AAGGACGGCA CTTCCGACCG CCACAATGGT
ACGGAAATCC AATTCGATAT GATCGAAGCG AACCTCAGAT CCTGCGGAGC AAAACAATGA
 
Protein sequence
MTEAQLFHGT FTLKRIWAAP PHRVFDAWSD PQLKAQWFTG PPERWTLLRR SMDFRVGGQE 
VLEGRFHESG TVTLFEARYH AIEPARRLVY TYDLHHSGRF HSVTLSSLQL ESEAGGTRVS
YTEQIVFLNG KDGTSDRHNG TEIQFDMIEA NLRSCGAKQ