| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5282 |
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| Symbol | |
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| ID | 5319584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 243945 |
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| End bp | 244877 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640777059 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001313991 |
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| Protein GI | 150377396 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.560852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGGTA TTATATATAT GCGTGAAGTG GATTTGAGGG CGGCCGACCT CAACCTGCTC
GTTGTGCTCA ACGCGCTGTT GGAAGAACGG AGCGTAACCC GGGCTGCAAC GCGGCTCGGC
ATGAGCCAAC CCGCTGCCAG CAGGGCGCTT GCGCGCTTGC GGGTACTCTT CTCCGATGCG
ATTCTGGTGG ACGGACCGGG CGGATATCTG CTTACCGCAC GCGCGGAAGA AATGCGCCCT
TCACTGCGCA ACACCCTGGC AGGCGTCAAC GAACTTCTCG ACGGCAGGAC TTTCGATCCG
ATGCGGGCGA CCGGGGCCGT GCGCCTGCTG ATGCTGGATC TTGAGGCCGC AGTCCTCGCC
CCGCGGTTGA TCTCCAGTCT CGCGGAGCAG GCGCCGGCAG TCGATCTTCA GGTGGTATCG
CCGGGGCTGC GGCCGCTTGA AGCGCTTGAG GCTGACGCTG TGGATGCCGT CATCGGCGTC
GTTGATGAAG CACCTGCCGG CATCCGGAAA CGCAAGCTGT ACCAGGATGG CTTCGTAACC
CTGATGCGAG CGGACCATCC TGCCGCGGGC CAAAAGCTTA CGTTGCAACG GTTCCTTGAA
CTGGATCATG TCGTCGTCAG CATCACCGGG ACCGGTCCGG CCTGGGTCGA CGAAATCCTC
GCTCGCCTGG GCAGGCAGCG CCGGGTGAAG GTACGTGTCC CAAGCTTCTT CGCGGCTGTC
GAAATCGCCG CGCGTTCCGA TCTGGTAATA ACTCTGCCGT CCAGCCTTGC CAGGACCGCC
GACATGCGGC GCTTCGTAAT GACGCCTCCG CCGCTCGACC TGGGCAGCGT GGTCATGAGC
CTCGCCTGGC ATGGGCGCAA TCAGGATGCC CCGCGACATG TGTGGCTCCG CAGAACGATC
GTCACGGCCG TGTCCGATAT AGGCCTGTCG TAA
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| Protein sequence | MDGIIYMREV DLRAADLNLL VVLNALLEER SVTRAATRLG MSQPAASRAL ARLRVLFSDA
ILVDGPGGYL LTARAEEMRP SLRNTLAGVN ELLDGRTFDP MRATGAVRLL MLDLEAAVLA
PRLISSLAEQ APAVDLQVVS PGLRPLEALE ADAVDAVIGV VDEAPAGIRK RKLYQDGFVT
LMRADHPAAG QKLTLQRFLE LDHVVVSITG TGPAWVDEIL ARLGRQRRVK VRVPSFFAAV
EIAARSDLVI TLPSSLARTA DMRRFVMTPP PLDLGSVVMS LAWHGRNQDA PRHVWLRRTI
VTAVSDIGLS
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