| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5276 |
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| Symbol | |
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| ID | 5319578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 234959 |
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| End bp | 236359 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640777053 |
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| Product | xanthine/uracil/vitamin C permease |
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| Protein accession | YP_001313985 |
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| Protein GI | 150377390 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2252] Permeases |
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| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.420426 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.809704 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTATC AGTCGAAAGT CGCGGGAGAT CCCGCCAGCC CGGAGAAACG CGGGCTCGGC
GGTGCCATCG ACCGCCTGTT TGAGGTCACC CGCAGCGGAT CGACGATCCG CACGGAAATC
ATCGCCGCCC TGACGATGTT TCTGGCGGCG TCCTATGTCA TCGTGGTCAA TCCCGCAATC
CTGCAGAATG CGGGCATCCC CTTTTCCGCA GGGGCCACGG CCACCGTCCT GGTCAGCTTT
ATCGGCAGCT GCGCTATGGG GCTTTATGCG CGCAGTCCCA TTCTCGTCGC GCCCGGAATG
GGCATAAACG CGCTTTTTGC CTACACGATG GTGATGGGAG CGAACGTGCC GCTGGAAATC
GCTCTCGGCT GCGTGTTCTG GGCCGGCATG CTCTTCACCA TTCTCGCCAT GCTCAACCTG
CGCACGGCCG TCATCGAGGC GATCCCGAAG GACCTGCGCT ACGGAATTGC TTGCGGCATC
GGCCTGTTCA TTGCGCTGAT CGGTCTGGAG AACGCCAAGT TCATCGTCGC CAGCCCGGAT
ACGATCGTCG CCCTGACCCA GTTCACGCCG GTTACGCTCA CCTTCGTCGC CGGCTTCATC
ATCACGGCTG CGCTGGTCGT GCGCCGCATA CCGGGCGCGA TGATGGCGGG CATGATCATC
ACCACCGTGC TTGCGATCCC GATCGGTCGC CTGTGGGGAG ACGGCAGCGC CTTTGCGGGT
GGCGCGCCGG ATGTCCACAC GCTCGTCAAC TGGAGCGGGC TGTTTGCCGC GCCCGATTTC
AGCTTTGTCG GCCGGGTCGA CCTTCTCGGT GCCCTTCAGG TCGCCTATGC GCCGTTCATC
TTCGTCTTTC TCTTCACCAA TTTCGTTGAG GCGCTGTCGA CATTCCTCGG GCTCGCGGAG
GCGGCCAACC TGAAGGACGA GAGCGGGATG CCACGCAACA TCAAGGAATC GATGCATATC
GATGCCGTAG CAGCGCTGAT TTCCGCCCCG CTCGGCACCA GCCCGGCAAC GGTCTACCTG
GAATCGGGCG CCGGCATCGC GCAGGGTGGG CGGACGGGCC TCGTCGCCTT CATTGCCGGG
CTCCTGTTCC TGCCGTTCCT GTTCCTTTCG CCGCTCCTTT CGCTGGTGCC GGCGATTGCC
ACGGCGCCCG TGCTCATCCT CACCGGCCTC TTCATGTCGG AGCCGATGGG AAGGATCAAC
TGGGCGGACA TGGAGGACGC CATCCCGGCC TTCCTCGCAA TCGTGCTCAT TCCGCTGACG
TTTTCGATTA CGCTCGGCCT GTCGCTTGCC ATCATCGCCT TCGTCGTGAT GAAGCTGGCG
CTCGGAAAGA TTTCCGAGAT CAGGCCCGTC ATGTGGTTCG TCGCCGTGCT TGCCGCGATG
CTGGTGATGC AGGTTCAATG A
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| Protein sequence | MNYQSKVAGD PASPEKRGLG GAIDRLFEVT RSGSTIRTEI IAALTMFLAA SYVIVVNPAI
LQNAGIPFSA GATATVLVSF IGSCAMGLYA RSPILVAPGM GINALFAYTM VMGANVPLEI
ALGCVFWAGM LFTILAMLNL RTAVIEAIPK DLRYGIACGI GLFIALIGLE NAKFIVASPD
TIVALTQFTP VTLTFVAGFI ITAALVVRRI PGAMMAGMII TTVLAIPIGR LWGDGSAFAG
GAPDVHTLVN WSGLFAAPDF SFVGRVDLLG ALQVAYAPFI FVFLFTNFVE ALSTFLGLAE
AANLKDESGM PRNIKESMHI DAVAALISAP LGTSPATVYL ESGAGIAQGG RTGLVAFIAG
LLFLPFLFLS PLLSLVPAIA TAPVLILTGL FMSEPMGRIN WADMEDAIPA FLAIVLIPLT
FSITLGLSLA IIAFVVMKLA LGKISEIRPV MWFVAVLAAM LVMQVQ
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