Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5272 |
Symbol | |
ID | 5319574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | + |
Start bp | 230690 |
End bp | 231592 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640777049 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001313981 |
Protein GI | 150377386 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCGCC CGTCGCTCAA CGACCTCACC GCCTTCGTGG CTGTTGCCAC GCACCGCAGC TTCCGCCGCG CAGCGGACGA GATCGGCACG GCACCTTCAA CGTTGAGCCA TGCGATGCGC GCATTGGAAG AACGCATGGG CGTGCGCCTT TTGCACCGCA CGACACGCAG CGTCTCGCCG ACGGAAGCCG GGCTCCGACT GCTCGGCCGC CTTCAGCCGG CGCTCGTCTC GCTGGACGAG GCGCTCGACA GCGTCGCCGG GTTCAGGGGC AATATCGCGG GAACAGTCCG CATCAATGCA CCGCGACTGG TTGCCGGGTT ACTCGTTCGC GAGGTCGTTC CGCAGATGGC GGGGCGCCAT CCGGACGTGA CCGTGGATAT TGTCGTCGAG GGACGGCTTA TCGATATCGT GTCCAGCGGG TTCGATGCCG GCGTGCGACT TCTGGGATCG ATCCCCAAGG ACATGATCGC CGTGCCGTTC GCACGCCCGT TGACGTTCAT CTGTATCGCC TCGACCGATT ATCTCGATCG CTTCGGCGAC CCGGGAACGC CCGAGGAACT GCAACGCCAC CATTGCATCG GCCATCGCAT GCCCAGCGGC AAGTTCTATC GATGGGAGTT CGAGCGCGCG GGCCAGGAAC TGGTGATAGA CGCAAACGGC CCCATCGTTC TCGACGACGA GGAGCTGATG GTCGAAGCCG CGATAGAAGG GCTTGGCATC GCTTACGTTG CGGATTGGGC TGCCGAAGCG GCCTTGGCCG ACGGCCGGCT GCGCAAGGTC CTGACCGCGT GGATGCCCGC GCCGGAAAGG GTTGCGGTCT ACTATCCCGG ACACCGAGCC GTGCCGCCCG CACTGCGGGC TTTTCTCGAT GCCGTCAAGG ACTTGCGGAA GACGGAACCT TAA
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Protein sequence | MSRPSLNDLT AFVAVATHRS FRRAADEIGT APSTLSHAMR ALEERMGVRL LHRTTRSVSP TEAGLRLLGR LQPALVSLDE ALDSVAGFRG NIAGTVRINA PRLVAGLLVR EVVPQMAGRH PDVTVDIVVE GRLIDIVSSG FDAGVRLLGS IPKDMIAVPF ARPLTFICIA STDYLDRFGD PGTPEELQRH HCIGHRMPSG KFYRWEFERA GQELVIDANG PIVLDDEELM VEAAIEGLGI AYVADWAAEA ALADGRLRKV LTAWMPAPER VAVYYPGHRA VPPALRAFLD AVKDLRKTEP
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