| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5270 |
|---|
| Symbol | |
|---|
| ID | 5319572 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009621 |
|---|
| Strand | + |
|---|
| Start bp | 229204 |
|---|
| End bp | 230130 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640777047 |
|---|
| Product | DNA polymerase III subunit epsilon |
|---|
| Protein accession | YP_001313979 |
|---|
| Protein GI | 150377384 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGGCGG CTGGTTCATC GGCGATGAAA CGCCGGCCCT CGACCGCTCC GAGCGAAGAC
GACATGGTGC GGCGCCTCCA CGCGACAGGG CGATATCGTA TCCTGAAGAA ACTGGAAGGT
CGGCCGGTTG CCTCCGCCGC GCGACCCGGA TTTCCGCTAA GGGGCTTGAT CCTCGACACC
GAGACCACCG GCCTCAATCA CCGTAAGGAC GAGATCATCG AGATCGGCGC CGTCGCGTTC
ACCTTCGATG ACGCTGGCAA TATCGGCGAT GTCATTGACC TCTATGGTGG ATTGCAGCAG
CCGAGCATAT CGGTTCCACC GGAGATCACG CGTCTGACCG GCATCACCGA CGAAATGGTG
CTTGGCCAAA AAATTGATCT GCATCGTCTG CGTGCCGTGG TCGAGCCGGC CGATCTCATC
ATCGCGCACA ATGCCGGTTT CGATCGGCCG TTCTGCGAAG CCTTCTCACC CATCTTCGCT
CGAAAGGCAT GGGCCTGTTC AGTCTCGGAG ATCGACTGGC CGGCGCGTGG CTTCGAAGGG
ACCAAGCTCG GCTACCTGAT CGGTCAGGCC GGCTATTTTC ATGAGGGGCA CCGGGCAGTG
GACGACTGTT TTGCTCTCCT CGAGGTGCTT GCTCAGGGCC GGGCAGAGGT CGAGCGCTCG
CCGTTTGCCG AACTCTACGG GGCAAGCCAG CGGTCGCGGA TTCGTCTCTT CGCGGAAAAC
AGTCCCTTTG ACATGAAAGA GCATCTGAAA GCGCGCGGCT ATCGCTGGTC GGATGGTAGT
GACGGTCGCC CGAAATCCTG GTGGATCGAG ATCGCCGAAG AGGCTCTCGA CGACGAACTT
CACTATCTCC GCTCCGAAAT CTATCGCTGG AATGAAGCGG ATCCGCCGAT AAGGCGCCTC
ACTGCGTTCG ACCGCTTCAA GGCGTGA
|
|---|
| Protein sequence | MKAAGSSAMK RRPSTAPSED DMVRRLHATG RYRILKKLEG RPVASAARPG FPLRGLILDT
ETTGLNHRKD EIIEIGAVAF TFDDAGNIGD VIDLYGGLQQ PSISVPPEIT RLTGITDEMV
LGQKIDLHRL RAVVEPADLI IAHNAGFDRP FCEAFSPIFA RKAWACSVSE IDWPARGFEG
TKLGYLIGQA GYFHEGHRAV DDCFALLEVL AQGRAEVERS PFAELYGASQ RSRIRLFAEN
SPFDMKEHLK ARGYRWSDGS DGRPKSWWIE IAEEALDDEL HYLRSEIYRW NEADPPIRRL
TAFDRFKA
|
|---|
| |