| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5263 |
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| Symbol | |
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| ID | 5319565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 223325 |
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| End bp | 224917 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640777040 |
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| Product | ABC transporter related |
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| Protein accession | YP_001313972 |
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| Protein GI | 150377377 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.417586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCGG TCCTCTCACC CCAATCGCTG GTGCCGCCTG CAAGCCCTGC CATTGCGGCG
CTCAGAGCCG ACGGGCTCGT CAAGACCTAT GGTTCGATCA CCGTCCTGTC GGACGTGACG
CTCGATATTC GTGCCGGAGA GGTCCACGCC ATCATCGGCG AGAATGGCGC GGGCAAGTCG
ACGCTGATGA AGCTGTTGTC CGGCCATGTC GCACCGACGG CTGGCCATCT GCTCATAGAA
GGTGAACCGG TCGAATTCCG CAACGCTGTG GAGGCGGAAG CCGCCGGCAT CGTGCTCGTG
CACCAGGAAA TCCTGCTTGC CGCCGATCTC ACTCTGGCGG AGAACCTGTT TTTAGGGCGG
GAGCTGGGTC GCGGCCTGCT GGTGGACGAC CGGCTGATGA ACCAGCGCAC GACCGAGCTT
CTGGCTCGCG TCGGCTCGAC GGCGCAGCCG CGCGACCGGG TGGGCGACCT GCCTCTCGCA
CAGCGGCAGC TGGTACAGAT CGCGCGTGCT CTCCTGGATG AACGCAAGGT CGTCATCCTG
GACGAGCCGA CTGCCATGCT TGCGAACGAT GAGGTCGCGG CGCTGCTTGA GATCGTCCGC
AGCCTGCGCG ACCGCGGTGT CGCAGTCCTT TATATTTCTC ACCGTCTCGA CGAAGTGCAG
GCGCTTGCCG ACCGCATCAC CGTGCTTCGC GACGGGCAAA TGATCGGCAC CTGGCCGGCG
GCGGGCCTCG GCCAGCGCGA TATGGCGGAG TTGATGGTCG GGCGAAAGCT CGAAATGCTC
TACCCGCACA AACGGCCCGC CGTCAGCGGC GCGCCGATCC TGTCTGTGAC CGAGCTTTCC
GTGGATCACG GCAGGCAGTC AGCGTCCTTC GCCGTCTGTC CGGGCGAGGT GCTTGGCATA
GGCGGCATGA TCGGGGCGGG GCGCACCGAA CTGATCGAGG GCCTGATGGG TCTTCGCCCG
TCGGAGGCGG CAAGCGTCGT CTTCAACGGC CGGGAGATCG TGCATCGCTC CGTGCGCAGC
CTGATGGATG CCGGTCTCGT CTACTTGACC GAGGACCGCA AGGGCAAGGG CCTGCTCCTG
GAGGAGAAGC TTGGCCCCAA CCTCACCCTG CAGGCTCTCG ACAAGGTCAA TCCCGGCACC
GCCCTTGACA AGCGGGCAGA GTTTTCTTGT CTCGAAAAAG CGGTTGAGGC CTACGACATC
CGCGTGCGCT CGCCGCGACT GGAGGCCGGC AAGCTTTCAG GCGGCAACCA GCAGAAGCTG
CTGCTTGCCA AGGTGATGAT GGCCGATCCC TCGGTGGTCG TCATCGACGA ACCGACGCGC
GGCATCGACA TCGGCAACAA GAGCCAGATC TACGACTTCA TCGACGCCAT GGTTCGCGCA
GGCAAGGCTT GCATCGTCAT CTCGTCGGAA ATGCCCGAAC TGGTGGGGCT TGCCGACCGC
GTTCTCGTGA TGCGGGCCGG CAGGATCGTC GCCGAATTTC GCGGCTCTGA AATCAATGAG
GAAAATGTCG TCTACGCCGC CACGACCGGT GGGCGCGCAG AAGCCGGAGA GTATGAACAT
GATCGCAGCG ACAGCAACAA TCGTACCGGC TGA
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| Protein sequence | MNAVLSPQSL VPPASPAIAA LRADGLVKTY GSITVLSDVT LDIRAGEVHA IIGENGAGKS
TLMKLLSGHV APTAGHLLIE GEPVEFRNAV EAEAAGIVLV HQEILLAADL TLAENLFLGR
ELGRGLLVDD RLMNQRTTEL LARVGSTAQP RDRVGDLPLA QRQLVQIARA LLDERKVVIL
DEPTAMLAND EVAALLEIVR SLRDRGVAVL YISHRLDEVQ ALADRITVLR DGQMIGTWPA
AGLGQRDMAE LMVGRKLEML YPHKRPAVSG APILSVTELS VDHGRQSASF AVCPGEVLGI
GGMIGAGRTE LIEGLMGLRP SEAASVVFNG REIVHRSVRS LMDAGLVYLT EDRKGKGLLL
EEKLGPNLTL QALDKVNPGT ALDKRAEFSC LEKAVEAYDI RVRSPRLEAG KLSGGNQQKL
LLAKVMMADP SVVVIDEPTR GIDIGNKSQI YDFIDAMVRA GKACIVISSE MPELVGLADR
VLVMRAGRIV AEFRGSEINE ENVVYAATTG GRAEAGEYEH DRSDSNNRTG
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