Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5246 |
Symbol | |
ID | 5319548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 208664 |
End bp | 209536 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640777023 |
Product | hypothetical protein |
Protein accession | YP_001313955 |
Protein GI | 150377360 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.428823 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.435436 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGTG CAATTCCCTC AATTTTCCTT CCCCGCCGTC GCGTTTTGCA GCTTGGCCTC GGCGCGACGT TCGCTTCAAC GGCAGGCTTC CCCTCGATCT CGCAGGCCGA CGAGCCGAGT GACGTCGAAG ACGAGGACGT CTTCCAATTT GCGCTCAACC TCGAATACAT GGAGGCCGAG TATTACCTGC GTGGCACGAC CGGAAAAGGA ATCGATGATT CTGACGCGGG TTCTGACGCC GGTTCCGTGA GCGGCGGCAA GCAAGTTTCC TTCGATACCC CGGCGATCCG CGCGTTCATG CGGGAGGTTG CGGAAAACGA ACTTGCGCAC GTCCGGTTCT ATCGCAAGAC GCTCGCAGAT CAGGCTGTGC CGAGACCGGC CATTGATTTC GACGGCGGCT TTGCTGCGGT CGCGAAAGCG GCGGGGCTCG GCGAGGACTT CGATCCATTC GGTAACGAGA CGAACTTCGT GCTCGGCGGT ATGCTATTCG AAGACGTTGG CGTTACCGCC TATGCCGGAG CGGCGACCGT CCTCAAGAAC AAGGACTTTC TCGCCGCGGC CGCGGGCATT CTGGCGGTTG AGGCTTATCA CATGGGAATG GCCCGATCGA CCCTGTATCG AAAGGGCGAA GAAGCCTGGA AGGCCGCACA AGCGGTATCC GACGCCCGGG ACAAGATCGA TGGCGCGGAA GACAAGGATC AAGGCATTCA GGAGGATGGC AACGCCAACA TTGTTCCCTC GACGCCGGAC GCGATTGCGT TCAGCCGGAC TCCGCAAGAG GTCCTACGCA TTGTGTATCT CTCGGACAAG GAAGGCACGA GTAAGGGTGG CTTTTACCCG AATGGCATGA ACGGCAAGAT AAAAAGTACC TGA
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Protein sequence | MIRAIPSIFL PRRRVLQLGL GATFASTAGF PSISQADEPS DVEDEDVFQF ALNLEYMEAE YYLRGTTGKG IDDSDAGSDA GSVSGGKQVS FDTPAIRAFM REVAENELAH VRFYRKTLAD QAVPRPAIDF DGGFAAVAKA AGLGEDFDPF GNETNFVLGG MLFEDVGVTA YAGAATVLKN KDFLAAAAGI LAVEAYHMGM ARSTLYRKGE EAWKAAQAVS DARDKIDGAE DKDQGIQEDG NANIVPSTPD AIAFSRTPQE VLRIVYLSDK EGTSKGGFYP NGMNGKIKST
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