Gene Smed_5245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5245 
Symbol 
ID5319547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp207720 
End bp208643 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content65% 
IMG OID640777022 
Productarginase/agmatinase/formiminoglutamase 
Protein accessionYP_001313954 
Protein GI150377359 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.341043 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.463568 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACCC TTCCCTATGC GATTCTCGAA GCCCCCTCTA CACTGGGCCT CGCGACCGAC 
GGTGTGGAGC ACTTGCCCGA CCAGCTCCTG GGCCTCGGTC TTGCGGAGCG CATCCATGCG
CGCCGCGCCG ATCGGCTGGC GGTGCTTCCG AAGGAGCCGG CGCCTGATGC CGAGACTGGC
ATCCTGAATA CCAGGGCAAT TGCGGCGTGG TCTCCCAAGC TCGCCGACGC GGTGGAAGCG
GTGGTTGACT CGGGCGAATT TCCGGTAGTG CTCGGCGGGG ATTGCACGAT CGTGCTGGGC
TCGATGCTCG CGTTTCGACG GCGCGGCCGT TACGGCCTGT TCTTCATCGA CGGCAACGCC
GATTTCTTCC AACCCGAGGC GGAACCCAAT GGTGAGGGCG CCTCGATGGA CCTTGCCCTG
GTCACCGGCT ACGGCCCGTC GCACCTGACC GACATTGAAG GTCGCAGTCC TCTGGTCCGT
CCCGAAGACG CTGTGGCGTT CGCGTATCGC GACCATAAGG ATCAGGAGGA GTACGGAAGC
CAGCCGCTCC CTAAAGAGCT CAAGGCGATC GACCTTCCCG CCGTGCGCGC GATGGGCATC
GAGGCCGCCG CGCGCAAAGC GGTCGACCAC CTGACCCGAG AGGCATTGGA CGGCTTCTTC
ATCCATCTCG ACGCGGATTG CCTCGACGAC GTTGTCATGC CGGCTGTCGA TTTCCGCGTT
CCGGGCGGTT TGTCGTGGGA CGAGCTAGGG GTCGCACTTC GGGTTGCCTT GGCGAGCGGC
AAGGCGGTTG GCATCGAGGT CACCATTTAC AATCCACGTC TTGATGCGGA CGGCAGCGCC
GGGCGCGGCC TGGCCGATGT ACTAGCGGCA GCGCTCGGAA CTGCAGCGCC CCGGGTCGAT
CGCCGAAGGG CGGATATCCG ATAA
 
Protein sequence
MPTLPYAILE APSTLGLATD GVEHLPDQLL GLGLAERIHA RRADRLAVLP KEPAPDAETG 
ILNTRAIAAW SPKLADAVEA VVDSGEFPVV LGGDCTIVLG SMLAFRRRGR YGLFFIDGNA
DFFQPEAEPN GEGASMDLAL VTGYGPSHLT DIEGRSPLVR PEDAVAFAYR DHKDQEEYGS
QPLPKELKAI DLPAVRAMGI EAAARKAVDH LTREALDGFF IHLDADCLDD VVMPAVDFRV
PGGLSWDELG VALRVALASG KAVGIEVTIY NPRLDADGSA GRGLADVLAA ALGTAAPRVD
RRRADIR