| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5238 |
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| Symbol | |
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| ID | 5319540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 199984 |
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| End bp | 201030 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640777015 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001313947 |
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| Protein GI | 150377352 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACAA TGCCAGCGTC GAGTGTCGGG CGGGGTATTG ACGTCAAATT TGCGTGCTCG
ATCGATGTAA GTACCCAGTC CTATCCTCAG CAAGATCAGT TTGAAATATT CAAGAACGCA
CATGCCGGCG TCGCGGATCT AACCTTCTGC AAGAGTGCGG ACGGGTCCTT TCCAGCCCGG
CAGATGGTGT GGATCCTGGG CTCAATGGTA ATTGTCTCCA GTATGCTGCC TGGAGCAGGT
TACGCACACG AGTGGCGGCA TTTAAAGAAG CCGGCCTTAG ACAACTGGTA CCTGTGGATT
CCACGACGGT CCGTCGATCA GGGCGTTGGC GCGCGGACCA TGCCTCATCT GCACTGTCTG
GCGAAGCCAT TTCACGCCAT CGTCGAGGAC GAGGGCGCAT GTGCGATCTA TTTTCCGTCA
GAGGGGTTCG TTCCTGCATC GATCCTTGAT TGCTTGCTCG ATAGATCTGT CCAGGGCGCG
TCGGGGCGTC TCCTCACTGA CTATCTCATG CTCCTGGTTC GATCACTGCC CGACATGACC
GTGGCAGAAG TTCCATACGT CGTCGAAGCA ACACGCAATC TCGTCGTTGC ATGTTTGGCG
CCTTCGCCTG ATCGTGTTGC AGACGCTCAA AGACCGATTG CGGCGGTCGT TCTGGAGCGG
GCCAAACGCA TGATAACCTC GAGACTTGTT GATCGCTCGC TCACCCCCGA GGCGATTTGC
TGCGAAATAG GCATCTCGCG CTCGAGGTTG TACAGGTTGT TCGAGCCGCT TGGTGGCGTC
GCGGCCTACA TCCGACACCA GCGCTTGGTT CGGACCCGCA GCGCTATTTC CAGTATTGAA
GACGTCCGGC CGATATCTCG CATCGCGGAG GAATGGGGGT TCGACGATCC TTCAGCATTC
AGCCGGGCCT TTAAGCACGA GTTTGGAATG ACCCCTAAGG AAGTAAGGGA GGTGGGATGG
AACGGGGCTG CTGCGCACGT GCGCAGGGAG AGGTTTCGCG AAGGAGCCCC GACTACACTC
CGCCAACTCC TTCAAGGCAT AGCGTGA
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| Protein sequence | MNTMPASSVG RGIDVKFACS IDVSTQSYPQ QDQFEIFKNA HAGVADLTFC KSADGSFPAR
QMVWILGSMV IVSSMLPGAG YAHEWRHLKK PALDNWYLWI PRRSVDQGVG ARTMPHLHCL
AKPFHAIVED EGACAIYFPS EGFVPASILD CLLDRSVQGA SGRLLTDYLM LLVRSLPDMT
VAEVPYVVEA TRNLVVACLA PSPDRVADAQ RPIAAVVLER AKRMITSRLV DRSLTPEAIC
CEIGISRSRL YRLFEPLGGV AAYIRHQRLV RTRSAISSIE DVRPISRIAE EWGFDDPSAF
SRAFKHEFGM TPKEVREVGW NGAAAHVRRE RFREGAPTTL RQLLQGIA
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