| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5231 |
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| Symbol | |
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| ID | 5319533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 190375 |
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| End bp | 191178 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640777008 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001313940 |
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| Protein GI | 150377345 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.150929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCTT CGAACGGCTT GTATGAACGT GCTGTTGAAA AATCTGCGCT CCGCCCCTTT
TGGCATCTGG ACGAAGCGCG GACGTTCTTT GTCGGGCCGC TCGAACGCAA CAGCCTTCAT
CAGCACGGTG CGCCCGTCTA CCTGGCCGGG ATCTACGGCA ATTTCCGGTT GCGAATCCAA
GGGGGTCGCT GGCTGTCGTG CCGCACGGCG GTCATTCCTG CCGGGGTGCT TCACGAACTT
GACATCGGCG GCTATCCCTT GGCGGTGTTT TACATCGAAG CAGACATAGG CAGCGCCGAT
CAGCTCGTGC CGCTATCCGG CAATAGTTGG GAAGCAGACG GCGTTCTCTT GGGACGCAGC
GGCGAGTTCT CAATCATGCG CGAGCTGTGG GAGGATTGTG CCGGCGCAAG ATGGGCAGGC
CAAGCGCTGG AGGACTTGCT CGACTTTTCA GCGCGGCGGG CCTCCAGAGG CCAAGACCTG
CGCATAGCAG CGGCAATCGA TTACCTGAGA ACGCACTCGG ACGAACTCAC CTCCGTAACG
CCGCTCGCAA AGCGCGTAGG CTTGTCAGCC TCCCAGTTTC AGCGCGTGTT CACTCGGGAG
GTGGGCGTGC CTTTTCGCCG CTACCGCGCC TGGAACCGGA TGCGCGTGGC CATCGGTGAG
ATCGTGAACG GCAGCAATTT TACGACGGCA GCCCATGCAG CAGGATTTTC GGACCAAGCG
CACTTCAACA ATGATTTCCG CCGCACCTTT GGCGCAGCGC CGTCGTTGAG TCTCCTGGAC
CTGAGAAAGC TCCCGTCCCG TTGA
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| Protein sequence | MPASNGLYER AVEKSALRPF WHLDEARTFF VGPLERNSLH QHGAPVYLAG IYGNFRLRIQ
GGRWLSCRTA VIPAGVLHEL DIGGYPLAVF YIEADIGSAD QLVPLSGNSW EADGVLLGRS
GEFSIMRELW EDCAGARWAG QALEDLLDFS ARRASRGQDL RIAAAIDYLR THSDELTSVT
PLAKRVGLSA SQFQRVFTRE VGVPFRRYRA WNRMRVAIGE IVNGSNFTTA AHAAGFSDQA
HFNNDFRRTF GAAPSLSLLD LRKLPSR
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