| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5192 |
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| Symbol | |
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| ID | 5319494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 147232 |
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| End bp | 148377 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640776970 |
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| Product | calcium/cation antiporter |
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| Protein accession | YP_001313902 |
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| Protein GI | 150377307 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0387] Ca2+/H+ antiporter |
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| TIGRFAM ID | [TIGR00378] calcium/proton exchanger (cax)
[TIGR00846] calcium/proton exchanger |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.666096 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCACTT TAGAGGCGAA GAGGTCCACC ACGCAGCCGC GATCTGCAAT CGAAACCGTC
GTACGGGAGC TTCGACGATC TCCACTCCTG GCGTTGATCT TCTTCGTACC TGTCGTCATT
CTCCTGGAGC GGATGGCTCC CGAGGCTCAT ACGTTGTTGT TTTTCGTTGC GATCGCAGCG
ATCGTACCGC TTGCTGCGCT CTTGAGCCGC GCGACGGAAT CGGTGGCAGC AAAGACCGGT
GATGCGGTCG GTGGCCTGCT CAATGCCACG CTCGGTAACC TGACGGAGCT CATTATCACG
CTCGCCGCTC TGCAGGCTGG GCAGTATCTT CTCGTCAAAG CCTCGATCGC GGGCGCGATC
GTCACCAATA GCCTTTTCAT GTTTGGAGGC GCTTTTCTCA TTGGCGGCCT GAAACATCAC
CTGCAGGAAT TCAACAGGGT GAATGCGCGT TTTCAGGCGA GCCTCCTGTT CCTTGCGACG
ATTGCGATCC TGGTGCCCTC GCTCACGAGC GGCTTGGACC GCACCCCGGC AGGAGAATTT
TCCCAGCAGT TGAGCCTAGG GTTGGCGATC CTGCTCATAG CCGTCTACGG ACTTGGCATG
GTGTTCTCCC TGAAGACGCA CAAGGAACTG TTTGCAAGCG TCGGTCAGGC CGAGGCGGGA
GAGGAGCCCT GGCCGCTTTC GATCGGGATT GTCGTTTTGA TTGTCGTCAC GCTCCTCGTC
GCGATAGTCA GCGAGATTTT CGTGGGATCA GTGCAAGCTG CCGCGCAACA TCTGGGACTG
ACACCGGCCT TCGTTGGTTT CATCGTCATC GCCCTGGTTG GCGGAGCTGC GGAAATGACC
ACGGCGTTCT CAGCGGCGCG CGCAAATCGC CTGGACCTCA GCGTTGGCAT CGCGCTGGGC
AGCGCTGCGC AGATCGCTCT CTTCGTTGCG CCGGTACTCG TCATTGTCAG TTACTTCATT
GGGCCCCAGC CGATGTCGCT CGAATTCTGG CCCGGTGCGG TGGCAATGAT GCTGGTGGCC
ACCATGGCGG CGACCCTTCT GTCCAATGGC GGGCACGCAG CGTGGTATGC GGGCGTCATG
GCGCTGGCGG TGTACGCCAT ATTTGCGTTG ACGCTGTTCC TCTTGCCCCC AGGAGTGACT
CAATGA
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| Protein sequence | MRTLEAKRST TQPRSAIETV VRELRRSPLL ALIFFVPVVI LLERMAPEAH TLLFFVAIAA
IVPLAALLSR ATESVAAKTG DAVGGLLNAT LGNLTELIIT LAALQAGQYL LVKASIAGAI
VTNSLFMFGG AFLIGGLKHH LQEFNRVNAR FQASLLFLAT IAILVPSLTS GLDRTPAGEF
SQQLSLGLAI LLIAVYGLGM VFSLKTHKEL FASVGQAEAG EEPWPLSIGI VVLIVVTLLV
AIVSEIFVGS VQAAAQHLGL TPAFVGFIVI ALVGGAAEMT TAFSAARANR LDLSVGIALG
SAAQIALFVA PVLVIVSYFI GPQPMSLEFW PGAVAMMLVA TMAATLLSNG GHAAWYAGVM
ALAVYAIFAL TLFLLPPGVT Q
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