Gene Smed_5179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5179 
Symbol 
ID5319481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp134133 
End bp134420 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content58% 
IMG OID640776957 
ProductNapD family protein 
Protein accessionYP_001313889 
Protein GI150377294 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3062] Uncharacterized protein involved in formation of periplasmic nitrate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.60419 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.85901 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGATT CGAGCGCGTC CTATCATATC TCCAGCGCCG TCATCATGAC GATGCCGCAC 
ATGCGGGAGC GTGTCGTCGC CACTCTCGCC GAGATACCGA ACGTTGAGGT TTATGCCCAC
GAGGCAGGAA AGATCGTCAT CGTGATCGAG GGCACGAGCA CCGGAATGCT CGGCGAAACT
CTTTCGCGTA TCGCGCTGCT CGAAGGCGTA GTGGCAGCCA ACATGGTGTT TGAGCATGTC
GAAACTCAAG GAGAGATCGG CCATGACCGG CGAACTGACG CGGCGTGA
 
Protein sequence
MSDSSASYHI SSAVIMTMPH MRERVVATLA EIPNVEVYAH EAGKIVIVIE GTSTGMLGET 
LSRIALLEGV VAANMVFEHV ETQGEIGHDR RTDAA