| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5154 |
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| Symbol | |
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| ID | 5319456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 107886 |
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| End bp | 109877 |
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| Gene Length | 1992 bp |
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| Protein Length | 663 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640776932 |
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| Product | hypothetical protein |
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| Protein accession | YP_001313864 |
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| Protein GI | 150377269 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0628] Predicted permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGAAGT TCTCGCGTGC CAATGCTCCA GATCGTGCCG CAGCCGCCAG CGGAATGCAG
CAGATCGCGC TTGCGCGCGG CACGGCAGCG GCAGCACAGC GGTCACGTCT GCCAACCTTC
GTCGCAACCG CAGCCACGGT TGCAGTGCTC TATTTCGCCC GTGATGTGTT TCTGCCTCTG
GCGATCGCCA TTTTGCTCAC CTTCGCTCTC GCGCCGCTGG TTTCGAAACT GCGCAGGGTC
GGTTGTCCCC GCTCAGTGGC GGTTGTCGGC ACGGTAACAA TCGCCTTTCT GTTCCTGTTC
GCATTCAGTG GCGTTGTCGC AATGCAAGTC AGCGAGGTCG CGCAAAATCT GCCGACCTAT
CAATACAACA TTGTCGAGAA GGTCAGGAGT TTGAAGGAGA CAGGGTCGGA GAGCCAGATC
CTCGACCGCC TTGGTCGCGT GATGGAGAGG ATCAACATAG AAATCAGCCG GCCCGAACCC
GAGCTTCGCG CCTCACCCGA AGCCGAACCT GAGAGAAAGC CCGTTCTTGT GGAGATTTTT
TCTCCACAGC GACCCGTCGA GACATTGAAG AATATCATTA ACCCGCTGCT TGGCCCCTTG
GCAACGACTG GCCTGGTCCT CGTCGTGGTT ATCTTCATGC TCTTCGAGAG GGAGGACTTG
CGGGACCGTT TCATTCGGTT GGTCGGCTAC GGCGATCTGC ATCGAACGAC CGAGGCACTT
CAGGACGCGG GTGCCCGGGT TGGCCGCTAT CTGCTCATGC AACTGGTCGT GAACATCACC
TACGGCATTC CGCTGGCGAT AGGCCTCTCG CTGCTAGGCA TTCCCAATGC CGTTCTCTGG
GGGATGCTGG CCATCCTACT GCGCTTCGTC CCCTATATCG GACCGGTGAT CGCCGCGGCG
CTGCCATTGT TCCTCGCTTT TGCCGCGGCA CCGGGATGGA GCTTGCTCAT TTGGACGGCT
GCCCTTTTCA TCGTTCTCGA ACTTCTCAGC AATAATGTGG TCGAGCCTTG GCTGTATGGT
TCACGCACCG GTCTGTCTCC GCTTGCGATC ATCGTCTCGG CGATCTTCTG GGCATGGCTC
TGGGGGCCGG TGGGATTGGT GCTGTCGACA CCTCTGACCG TGTGCCTCGT AGTCCTCGGA
CGGCACGTCC CACAGTTCGA GTTCCTGGAG ATTCTGCTGG GCAACGAGCC CGTTCTCGAT
CCGAAGGAGC GCCTCTACCA GCGCCTGCTC GCCGGTGATC CGGATGAGGC GACGGACAAC
GCCGAAGATA TGCTTGAGGA GAAATATCTC GTCGAGTTCT ACGACACCGT TGCGATCCCC
GCATTGCTCC TGGCCGAGCG GGACCGCGCA CGGGGCGCCT TGACGAGCGC CCAGGCAGCT
CAGATTGCCC AGAGTGCGAA CACACTTATT GCCAATCTCG AGGAGATTGC CGGCGAAGAG
GAGGGGGAGG AGGAAACGAG CACGGAAGAT CAGGAAAGTG ACGGGGACGG GGACATGGAT
GAATATGATC TTCCCACGGG AGACGGGAAA TCTGTCCTTT GCGTCGGGGG GCGTGGTGAC
CTCGACGATG TTGCCGCTTC AATGCTCGCC CAGACCCTTT GGATCCAGGG CGCGGATGCT
GCGCAGGCCG GCCACGAAGT TCTCAAGGCG GGCAATATAA AAGGTCTGAA GCTTGAAGGG
CGCAACGCAG TCGTCCTAAG CGTTCTCGAT CAGGATTTTA TGCGGCATGC CAAATTTACC
GTGCGCCGGC TGAAACGTAT GGCGCCTGCG GCGCGTATCG GGATCGTCCT GTGGCAGGAG
AACGGCCGGC CAGGAGCAAC CGAGCGAGAC CAACTTATTG AATCGATGCA GGCGGATTTC
GTCGTATTCG GGATGGGGGA CGCCGTCCGC GAGGCGCTCT CCGACGCCGC TCCTCGTCCG
TTGAAACTCG CCCATCCAAA GATCGCACCT GGATACGCCA TGCGGCGAAG CAAGCGCGTC
GAGAGATCAT AA
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| Protein sequence | MLKFSRANAP DRAAAASGMQ QIALARGTAA AAQRSRLPTF VATAATVAVL YFARDVFLPL
AIAILLTFAL APLVSKLRRV GCPRSVAVVG TVTIAFLFLF AFSGVVAMQV SEVAQNLPTY
QYNIVEKVRS LKETGSESQI LDRLGRVMER INIEISRPEP ELRASPEAEP ERKPVLVEIF
SPQRPVETLK NIINPLLGPL ATTGLVLVVV IFMLFEREDL RDRFIRLVGY GDLHRTTEAL
QDAGARVGRY LLMQLVVNIT YGIPLAIGLS LLGIPNAVLW GMLAILLRFV PYIGPVIAAA
LPLFLAFAAA PGWSLLIWTA ALFIVLELLS NNVVEPWLYG SRTGLSPLAI IVSAIFWAWL
WGPVGLVLST PLTVCLVVLG RHVPQFEFLE ILLGNEPVLD PKERLYQRLL AGDPDEATDN
AEDMLEEKYL VEFYDTVAIP ALLLAERDRA RGALTSAQAA QIAQSANTLI ANLEEIAGEE
EGEEETSTED QESDGDGDMD EYDLPTGDGK SVLCVGGRGD LDDVAASMLA QTLWIQGADA
AQAGHEVLKA GNIKGLKLEG RNAVVLSVLD QDFMRHAKFT VRRLKRMAPA ARIGIVLWQE
NGRPGATERD QLIESMQADF VVFGMGDAVR EALSDAAPRP LKLAHPKIAP GYAMRRSKRV
ERS
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