| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5130 |
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| Symbol | |
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| ID | 5319432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 83762 |
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| End bp | 84289 |
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| Gene Length | 528 bp |
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| Protein Length | 175 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640776908 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001313840 |
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| Protein GI | 150377245 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.22563 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATGA TAACAGGCGA GTCCGGCCGG ATGGTGCTGT GCCGTCCGAG AGGAACACGC
CGGACCACGG AATTGGCATT GGCGATCGTT TCGGCTGTCC TTCTTTCGAG CTGTCAGACA
TCAGAGGTGT TGTCGAGCGC CGATGTTGAT CCGACCTCCG CTGTCACCGG AGGGGACGTG
AGCAGGTCCG ATCTTGATCA GGGCAAGCTT CAATTCATGA ACGGCAATTA CGGTCTGGCC
GAGAAGCACT TTCGGGAGGC GGTTGAGCTG CGGCGAGACA ATGCTGAGGC GCTGATGGGA
CTGGCGGCGT GCTACGACCG GCTCGGCCGG TTCGATCTGG CGGACAGAAC CTATAGCCAG
TTGCTCAAGG TGGCAGGCCG CCAGCCACGC ATCGTCAACA ACATGGGATA CTCCCATTAT
CTTCGAGGCG AGAAGGCAAA GGCCCGTACG CTGCTGCTCG AAGCGCGTGC GGCATTGCCC
GGGGACAATA CGATTGAAGC CAATCTCGCT TTATTGGACC GGAGCTAG
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| Protein sequence | MKMITGESGR MVLCRPRGTR RTTELALAIV SAVLLSSCQT SEVLSSADVD PTSAVTGGDV
SRSDLDQGKL QFMNGNYGLA EKHFREAVEL RRDNAEALMG LAACYDRLGR FDLADRTYSQ
LLKVAGRQPR IVNNMGYSHY LRGEKAKART LLLEARAALP GDNTIEANLA LLDRS
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