Gene Smed_5099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5099 
Symbol 
ID5319401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp47354 
End bp47890 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content62% 
IMG OID640776877 
ProductRES domain-containing protein 
Protein accessionYP_001313809 
Protein GI150377214 
COG category[S] Function unknown 
COG ID[COG5654] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.033489 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.48502 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGTTCA CCGGAACCTG CTATCGCGCG CATGACCCAC GCTGGGCTTT CAAACCCACA 
TCCGGCGATG GCGCGGCAAT GAAGGGCGCG CGCTTCAATC CGAGGGGTGT GAAGACGCTG
TATCTCGCAC TCAGCATCAT GACAGCGATC AAAGAGGCCA ATCAGGGCTT CGCCCATCGC
ATCGATCCTT GCGTACTTTG CTCCTACGAT GTCGATTGCG AAGGCATTGC TGATCTGACG
ACGGAAAAGG GGAGGGCCGA ATACCGGGTA TCGCAGGAGG AGATGGCCTG CAGCTGGGCA
GGCGCGCTCG CCGAGGGGAG GCGGCCGGCT TCCTGGGCGA TTTACGATCG CCTCCATGCG
AGCGGTGTCC GGGTCGGACA TGGGATCGCC GGCATTCTCG TTCCGAGTTT CGCACCCGGG
ACCGAAGCCG GAGACCGGGA TCTCGTTCTG TGGAAATGGG GACCCGATCT GCCGCACCGC
GTCGACGTGC ATGATCCGAG CGGCCGGCTT CCCAAGGATC AGCTCTCCTG GAGTTGA
 
Protein sequence
MRFTGTCYRA HDPRWAFKPT SGDGAAMKGA RFNPRGVKTL YLALSIMTAI KEANQGFAHR 
IDPCVLCSYD VDCEGIADLT TEKGRAEYRV SQEEMACSWA GALAEGRRPA SWAIYDRLHA
SGVRVGHGIA GILVPSFAPG TEAGDRDLVL WKWGPDLPHR VDVHDPSGRL PKDQLSWS