| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5091 |
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| Symbol | |
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| ID | 5319393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 40311 |
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| End bp | 41120 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640776870 |
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| Product | beta-ketoadipate pathway transcription regulator |
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| Protein accession | YP_001313802 |
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| Protein GI | 150377207 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | [TIGR02431] beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGTTATT GGAACGATGT TCGATTATCG CACAAGGGAA AGTCCTCGGT GGCTGTCAAA
GAGCGAGACC TCATGGGCGG CCTGGCCAAG GGCCTGAAAG TCATCGAAGC GTTCTCTGCG
GAGAGACCTC GGCTGAGCAT TGCGGAAACT GCTGACATCG TGGGGCTGGA TCGGGCGACC
ACCCGACGCT GCCTTCTCAC CCTTTGGGAA CTCGGCTACG CGGCCTATGA TGGAAAGTTC
TTTACGGTCA CGCCACGTGT ACTGCGACTG GGCATTGGCT GCCTCGCCTC GCTGCCCATT
CCCCGCATCG TGCAACCCTA TTTGGACGCG CTCTCCGAGA AGATCGGACA AAGCAGTTCC
GTATCGATCC TCGACGAGAC CGAGATAGTC TATATCGCCA GAGCCGCACA GCGGCGGGTT
ATGTCCATCT CTCTCATGCC AGGCTCCCGA TTGCCGGCCT ACTGCACGTC TATGGGCCGC
GTGCTCTTGG CGGCGCTGAG TGAGGACGAA GCGCGAAGCA CCCTGGAGAA GTCGGCGCTG
GTGGCCCGCA CCGAGCACAC GGAAACGGAT ATCGAACGCC TGCTTGCAGA CATCAAGGAG
ACGAGAGAGC GAGGTTACGC CGCGATCGAC CAGGAAGTCG AACTGGGCCT TGTTTCAGTT
GCCGTTCCGC TGAAAGCCGC AGGTGGCCGG GTCGTGGCTG CAGCCAACAT CGGCATGGCT
GCGAGCGGAC GGTCCATGAA GGAGGTCATC GACCACTATC TGCCCCCGCT ATTGGAGTTG
CAGGCCGATC TTCGTCAGAC ACTGGTTTAG
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| Protein sequence | MRYWNDVRLS HKGKSSVAVK ERDLMGGLAK GLKVIEAFSA ERPRLSIAET ADIVGLDRAT
TRRCLLTLWE LGYAAYDGKF FTVTPRVLRL GIGCLASLPI PRIVQPYLDA LSEKIGQSSS
VSILDETEIV YIARAAQRRV MSISLMPGSR LPAYCTSMGR VLLAALSEDE ARSTLEKSAL
VARTEHTETD IERLLADIKE TRERGYAAID QEVELGLVSV AVPLKAAGGR VVAAANIGMA
ASGRSMKEVI DHYLPPLLEL QADLRQTLV
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