| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5089 |
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| Symbol | |
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| ID | 5319391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 37849 |
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| End bp | 39204 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640776868 |
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| Product | aminotransferase class-III |
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| Protein accession | YP_001313800 |
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| Protein GI | 150377205 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.447769 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAACA ATCAGGATCC CGCCTTCTGG GCGGCCGCGG GCAGGCATCT GATCCGCTAT
GGCGGAAGCT TCGACCCCGC GATCATCGAG CGGGCCAGGG GCTCTTTCGT TTTTGATGCC
GACGACCGGC CGATACTCGA CTTCACCTCG GGCCAGATGA GTGCACTGGT CGGCCATTCC
CATCCCCGGA TCGTCGCGAC CGTTCAGCGG CAGATGGAAA AGGTCGCCCA TCTTTTCAGC
GGAATGCTGT CGCGACCGGT CGTCGATCTC GCCGAGCGGC TGGCGGCGCT GGCACCCGGT
CTCGACAGGG TCATGCTGTT GTCGACCGGG GCGGAATCCA ACGAGGCGGC CATCCGCATG
GCCAAGCTCG TCACCGGCAG GCACGAAATC GTCGCATTCT CAAAGAGCTG GCACGGCATG
ACCGGCGCGG CGAGTTCGGC AACATACAGC GCCGGCCGCA AGGGTTATGG CCCGGCCATG
GTCGGTTCTC TGACCATTCC GGCACCCAAC ACATTCCGCC CGCGTTTTCG GCATGGCGAC
GGGAGCCTGG ACTGGAGGAC GGAGCTGGAC GATGCTTTCG CGCTGATCGA CAGTCAGTCG
ACCGGCAGCC TCGCCGCCTT CATCGCCGAG CCCATCCTGT CGAGCGGCGG ATTGCTCGAA
CTGCCGCAGG GCTATCTCGC AGCGCTCATG GAAAAATGCC GCGAGCGCGG AATGCTGCTC
ATTCTGGACG AGGCGCAAAC CGGAATCGGC CGGACTGGAA CCATGTTCGC GTTCCAGCGC
GACGGCGTTA CGCCCGATAT TCTGACGCTC TCGAAAACGA TCGGCGCCGG CCTGCCACTC
TCCGCCGTCA TGACAACGAC GGAGATCGAG GAGGCGGCGC ATGAGAAGGG CTTCCTTTTC
TACACCACGC ATGTCTCCGA TCCCCTGCCG GCCGCGGTGG GCCTTGCCGT GCTCGACGTC
GTCGCCGAGG AAGGGCTTGT CGAGCGCGCC CGTCATATCG GCGGCGAGCT CTTCGATGGC
CTGTCGCAGT TGAAGCAGAG ATTCGACTGC GTCGGCGACG TACGCGGTCG CGGCCTTATG
CTCGGCGTCG AAATCGTGAA ACCGGGTGAG AGCAGAAGTG CCGATCATGA GCTTGGCAGC
CGGATTGCCG CCGAAGCTTT CCGCCGTGGG CTCAGTATGA ATATCGTTAA GCTTCCCGGT
ATGGGCGGCG TCTTCCGCAT CGCGCCGCCA TTGACGATTT CCGAGGAGGA GATCGAGCTT
GGCCTGCGCA TCATCACGCA ATCCATCGAA GCATCATTGG CCATCGAAGC GGCATTGCCG
CTCGGCGCAA GCCGTCAGGA CGTTGCGGCA GAATAG
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| Protein sequence | MSNNQDPAFW AAAGRHLIRY GGSFDPAIIE RARGSFVFDA DDRPILDFTS GQMSALVGHS
HPRIVATVQR QMEKVAHLFS GMLSRPVVDL AERLAALAPG LDRVMLLSTG AESNEAAIRM
AKLVTGRHEI VAFSKSWHGM TGAASSATYS AGRKGYGPAM VGSLTIPAPN TFRPRFRHGD
GSLDWRTELD DAFALIDSQS TGSLAAFIAE PILSSGGLLE LPQGYLAALM EKCRERGMLL
ILDEAQTGIG RTGTMFAFQR DGVTPDILTL SKTIGAGLPL SAVMTTTEIE EAAHEKGFLF
YTTHVSDPLP AAVGLAVLDV VAEEGLVERA RHIGGELFDG LSQLKQRFDC VGDVRGRGLM
LGVEIVKPGE SRSADHELGS RIAAEAFRRG LSMNIVKLPG MGGVFRIAPP LTISEEEIEL
GLRIITQSIE ASLAIEAALP LGASRQDVAA E
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