Gene Smed_5047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5047 
Symbol 
ID5317921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1567604 
End bp1568056 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content59% 
IMG OID640776827 
Producthypothetical protein 
Protein accessionYP_001313759 
Protein GI150377163 
COG category[S] Function unknown 
COG ID[COG5489] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.33465 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTTTGCG GTAACCCGCT AGAAGTTGAA CTTGGTGCCG CCTGGCAGAA GCGCTCCAGC 
GAGAGCGATC GCGACTACCT CTCGGTCAAG CTCGATGCCC CTAGCTTCCC GGCTCCGATC
TACGCGACGC TCGCGGAAGT TGATGGAAGA CGATCCATGA CCCCGCCTTC TCGCGATGCA
CGCCACGGTC GTCGCAGGCA GCAAGAGAAG CGGTGGAAGA TCGAAGGCCT GTGCACCGAG
AGCTACAGAA GCGCCGCGAG CGGGCTCGTT TGCCACGAAG CGGCAATGTA TGTGATTACG
GATGACGACC TGCACCTTGG TGTCTTTCCC GTTCGTAGTT CCGGACCAGG TGGATTGATC
CGCTTGTTTG ACGGCGTATT GCCCCAGTCG CATGACGAGC GGAAGAAGCA GAAACCCGAC
CTGGAAGCAC TTACCCTAAT CCCCCCACAG TGA
 
Protein sequence
MFCGNPLEVE LGAAWQKRSS ESDRDYLSVK LDAPSFPAPI YATLAEVDGR RSMTPPSRDA 
RHGRRRQQEK RWKIEGLCTE SYRSAASGLV CHEAAMYVIT DDDLHLGVFP VRSSGPGGLI
RLFDGVLPQS HDERKKQKPD LEALTLIPPQ